Evidence map›Paper›PMID 12654783›Full record

ArticleInfection and immunity2003

Expression of multiple outer membrane protein sequence variants from a single genomic locus of Anaplasma phagocytophilum.

A F Barbet, P F M Meeus, M Bélanger, M V Bowie, J Yi, A M Lundgren, A R Alleman, S J Wong, F K Chu, U G Munderloh and 1 more

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
7.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 103 citations in OpenAlex.

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  8. Comparative Whole Genome Analysis of anPathogens (Basel, Switzerland) · 2022
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  9. Epidemiological and Clinicopathological Features ofFrontiers in veterinary science · 2021
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  10. Global Transcription Profiles ofFrontiers in veterinary science · 2020
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  14. Review
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

A F BarbetDepartment of Pathobiology, College of Veterinary Medicine, University of Florida, PO Box 110880, Gainesville, FL 32611, USA. barbeta@mail.vetmed.ufl.edu
P F M Meeus
M Bélanger
M V Bowie
J Yi
A M Lundgren
A R Alleman
S J Wong
F K Chu
U G Munderloh
S D Jauron
University of Florida · USUniversity of Minnesota · USNew York State Department of Health · USWadsworth Center · US

Funding

Comparison of Human Ehrlichiosis Agent GenomesR01AI047885 · NIAID · OHIO STATE UNIVERSITY · PI RIKIHISA, YASUKO · 2000 to 2010
$3.0M
MOLECULAR MECHANISMS OF MSP2 VARIATION IN RICKETTSIAER01AI045580 · NIAID · UNIVERSITY OF FLORIDA · PI BARBET, ANTHONY F. · 1999 to 2007
$2.0M
NIAID NIH HHS AI 45580NIAID NIH HHS R01 AI045580NIAID NIH HHS R01 AI047885NIAID NIH HHS R01 AI 47885PHS HHS 814-2346A
6 · The paper itself

Abstract

Anaplasma phagocytophilum is the causative agent of an emerging tick-borne zoonosis in the United States and Europe. The organism causes a febrile illness accompanied by other nonspecific symptoms and can be fatal, especially if treatment is delayed. Persistence of A. phagocytophilum within mammalian reservoir hosts is important for ensuring continued disease transmission. In the related organism Anaplasma marginale, persistence is associated with antigenic variation of the immunoprotective outer membrane protein MSP2. Extensive diversity of MSP2 is achieved by combinatorial gene conversion of a genomic expression site by truncated pseudogenes. The major outer membrane protein of A. phagocytophilum, MSP2(P44), is homologous to MSP2 of A. marginale, has a similar organization of conserved and variable regions, and is also encoded by a multigene family containing some truncated gene copies. This suggests that the two organisms could use similar mechanisms to generate diversity in outer membrane proteins from their small genomes. We define here a genomic expression site for MSP2(P44) in A. phagocytophilum. As in A. marginale, the msp2(p44) gene in this expression site is polymorphic in all populations of organisms we have examined, whether organisms are obtained from in vitro culture in human HL-60 cells, from culture in the tick cell line ISE6, or from infected human blood. Changes in culture conditions were found to favor the growth and predominance of certain msp2(p44) variants. Insertions, deletions, and substitutions in the region of the genomic expression site encoding the central hypervariable region matched sequence polymorphisms in msp2(p44) mRNA. These data suggest that, similarly to A. marginale, A. phagocytophilum uses combinatorial mechanisms to generate a large array of outer membrane protein variants. Such gene polymorphism has profound implications for the design of vaccines, diagnostic tests, and therapy.

Indexed as

Amino Acid SequenceAntigens, BacterialGenetic VariationAnaplasma phagocytophilumAnimalsBacterial Outer Membrane ProteinsBase SequenceCell LineEhrlichiosisGenome, BacterialHL-60 CellsHumansMolecular Sequence DataRNA, MessengerSequence Analysis, DNATicksAntigens, BacterialBacterial Outer Membrane Proteinsmsp2 protein, Anaplasma marginaleRNA, Messenger

Identifiers

PMID12654783
PMCPMC152091
OpenAlexW2138507128

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.