Evidence map›Paper›PMID 12644936›Full record

ArticleHuman genetics2003

Modulating action of the new polymorphism L436F detected in the GLB1 gene of a type-II GM1 gangliosidosis patient.

Anna Caciotti, Tiziana Bardelli, John Cunningham, Alessandra D'Azzo, Enrico Zammarchi, Amelia Morrone

Abstract readCase Reports
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In one paragraph

Article in Human genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. GM1 Gangliosidosis: Mechanisms and Management.The application of clinical genetics · 2021
    Review
  7. Article
  8. Article
  9. Epidemiology of mucopolysaccharidoses.Molecular genetics and metabolism · 2017
    Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Anna CaciottiDepartment of Paediatrics, University of Florence, Children's Hospital A.Meyer, Via Luca Giordano 13, 50132, Florence, Italy.
Tiziana Bardelli
John Cunningham
Alessandra D'Azzo
Enrico Zammarchi
Amelia Morrone
St. Jude Children's Research Hospital · USUniversity of Florence · ITMeyer Children's Hospital · IT

Funding

FUNCTIONAL/STRUCTURAL STUDIES OF MAMMALIAN NEURAMINIDASER01GM060950 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI D'AZZO, ALESSANDRA · 2000 to 2009
$2.9M
NIDDK NIH HHS DK/NS52025NIGMS NIH HHS GM60950
6 · The paper itself

Abstract

We report the modulating action of the L436F new polymorphism identified in the GLB1 gene of a patient affected by GM1 gangliosidosis with onset at 17 months and rapidly progressive psychomotor deterioration. Sequencing analysis and familial restriction studies revealed that the maternal allele of this patient carried the L436F polymorphism in cis with the known R201C mutation. The new mutation R68W was identified in his paternal allele. Since the GLB1 activity of the patient's leukocytes was very low and compatible with both the type-I and the type-II form of the disease, the potential impact of each mutation was investigated by expression studies in COS1 cells, and Western blots. Expression study of the R68W mutated allele resulted in no GLB1 activity. Transfection with a vector carrying the R201C mutation gave rise to a residual GLB1 activity, which, interestingly, was severely reduced in transfection with the L436F/R201C allele. These expression studies, together with co-transfection experiments, suggest that the R201C/L436F GLB1 "complex allele" leads to this patient's clinical and biochemical findings. The type-II phenotype of the disease is subdivided into late infantile and juvenile forms. The clinical and molecular characterization of this patient as late-infantile GM1 gangliosidosis is in keeping with a clear-cut division between the two sub forms of the type-II phenotype. The modulating role of the L436F polymorphism should be stressed as a cause of this patient's condition. This model suggests that the combination of missense mutations or polymorphisms should be evaluated when diagnosing inherited genetic disorders.

Indexed as

AllelesAmino Acid SubstitutionAnimalsbeta-GalactosidaseBlotting, WesternChlorocebus aethiopsCOS CellsDNA Mutational AnalysisDNA PrimersGangliosidosis, GM1HumansInfantLeukocytesMaleMutagenesis, Site-DirectedPhenotypebeta-GalactosidaseDNA Primers

Identifiers

PMID12644936
OpenAlexW1576168172

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.