Evidence map›Paper›PMID 12644935›Full record

ArticleHuman genetics2003

Examination of sequence homology between human chromosome 20 and the mouse genome: intense conservation of many genomic elements.

Lingxiang Zhu, Gary D Swergold, Michael F Seldin

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Human genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Neuropeptide B-deficient mice demonstrate hyperalgesia in response to inflammatory pain.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  7. A novel mouse Chromosome 2 congenic strain with obesity phenotypes.Mammalian genome : official journal of the International Mammalian Genome Society · 2004
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Lingxiang ZhuRowe Program in Genetics, Department of Biological Chemistry and Department of Medicine, University of California at Davis, Davis, CA 95616, USA.
Gary D Swergold
Michael F Seldin

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The conservation of genomic organization of mammalian species has been of interest for its usefulness in characterizing the genetics of traits and diseases and as one tool for examining evolution. The recent rough draft sequencing of the mouse and human genomes provides the opportunity for more detailed analyses. The current study examines the extent of homology between human chromosome 20 and the mouse genome by comparing putative coding and non-coding sequence to provide insight into organizational and sequence similarities between the species. The relative position of each of 460 putative coding orthologues was the same in both species, except for a single genomic segment rearrangement. The similarity extended to exon/intron structure, the size of introns, as well as strong evidence for the conservation of position of ancient LINE-1, LINE-2 and LTR repetitive sequence and the subtelomeric region of the long arm of human chromosome 20 and that of mouse chromosome 2. There was also evidence for conservation of a limited amount of non-coding single-copy sequence. Together these data provide additional insight into the extent of conservation of mammalian genomic organization and sequence.

Indexed as

GenomeAnimalsBase SequenceBiological EvolutionChromosomes, Human, Pair 20Conserved SequenceExonsHumansIntronsMiceModels, GeneticMolecular Sequence DataRepetitive Sequences, Nucleic AcidSequence Homology, Nucleic AcidUntranslated RegionsUntranslated Regions

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.