Evidence map›Paper›PMID 12642870›Full record

ArticleOncogene2003

Mutations of TP53 induce loss of DNA methylation and amplification of the TROP1 gene.

Ashraf F Nasr, Michele Nutini, Barbara Palombo, Emanuela Guerra, Savenio Alberti

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. A non-mutatedFrontiers in oncology · 2023
    Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Pharmacogenetic and pharmacogenomic discovery strategies.Cancer drug resistance (Alhambra, Calif.) · 2019
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Epigenetic heredity of human height.Physiological reports · 2014
    Article
  18. Article
  19. Article
  20. Human maintenance DNA (cytosine-5)-methyltransferase and p53 modulate expression of p53-repressed promoters.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ashraf F NasrDepartment of Cell Biology and Oncology, Instituto di Ricerche Farmacologiche' Mario Negri, Chieti, Italy.
Michele Nutini
Barbara Palombo
Emanuela Guerra
Savenio Alberti
Mario Negri Institute for Pharmacological Research · ITMario Negri Sud Foundation · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

p53 and DNA methylation play key roles in the maintenance of genome stability. In this work, we demonstrate that the two mechanisms are linked and that p53 plays a role in the maintenance of the DNA methylation levels. The loss of p53 was shown to induce loss of DNA methylation in the TROP1 gene, a human cancer-expressed locus that undergoes amplification when hypomethylated. This demethylation was reverted by the reintroduction of a wild-type TP53 (wtTP53) in the TP53-null cells. Using a gene-amplification assay in vivo, we demonstrate that the loss of p53 leads to a demethylation-dependent TROP1 gene amplification. The induction of gene amplification was reverted by the expression of a wtTP53 gene or by in vitro methylation of the transfected DNA with the Sss I DNA methylase. Taken together, these findings demonstrate that the inactivation of TP53 induces loss of DNA methylation and DNA methylation-dependent gene amplification.

Indexed as

Gene AmplificationGenes, p53MutationAntigens, NeoplasmCell Adhesion MoleculesEpithelial Cell Adhesion MoleculeFlow CytometryHumansLi-Fraumeni SyndromeTransfectionAntigens, NeoplasmCell Adhesion MoleculesEpithelial Cell Adhesion Molecule

Identifiers

PMID12642870
OpenAlexW1965590405

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.