Evidence map›Paper›PMID 12634405›Full record

ArticleJournal of virology2003

The CCR5 and CXCR4 coreceptors are both used by human immunodeficiency virus type 1 primary isolates from subtype C.

Tonie Cilliers, Jabulani Nhlapo, Mia Coetzer, Dragana Orlovic, Thomas Ketas, William C Olson, John P Moore, Alexandra Trkola, Lynn Morris

Abstract read
In one paragraph

Article in Journal of virology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 197 citations in OpenAlex.

  1. Review
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  6. Review
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  8. HIV-1CViruses · 2020
    Article
  9. A near full-length HIV-1 genome from 1966 recovered from formalin-fixed paraffin-embedded tissue.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  10. Article
  11. Article
  12. Next generation sequencing reveals a high frequency of CXCR4 utilizing viruses in HIV-1 chronically infected drug experienced individuals in South Africa.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2018
    Article
  13. Review
  14. Article
  15. Article
  16. Article
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  18. Article
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Tonie CilliersAIDS Virus Research Unit, National Institute for Communicable Diseases, Johannesburg, South Africa.
Jabulani Nhlapo
Mia Coetzer
Dragana Orlovic
Thomas Ketas
William C Olson
John P Moore
Alexandra Trkola
Lynn Morris
National Institute for Communicable DiseasesProgenics Pharmaceuticals (United States) · USCornell University · USJohannesburg Hospital · ZAUniversity Hospital of Zurich · CH

Funding

SECOND RECEPTORS FOR PRIMATE IMMUNODEFICIENCY VIRUSESR01AI041420 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI MOORE, JOHN P · 1997 to 2015
$7.3M
HIV 1 fusion/entry inhibitors in tissue modelsP01AI052048 · NIAID · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI MOORE, JOHN P · 2001 to 2004
$5.2M
FIC NIH HHS TWO-0231NIAID NIH HHS P01 AI052048NIAID NIH HHS P01 AI52048NIAID NIH HHS R01 AI041420NIAID NIH HHS R01 AI41420Wellcome Trust
6 · The paper itself

Abstract

Human immunodeficiency virus type 1 (HIV-1) subtype C viruses with different coreceptor usage profiles were isolated from 29 South African patients with advanced AIDS. All 24 R5 isolates were inhibited by the CCR5-specific agents, PRO 140 and RANTES, while the two X4 viruses and the three R5X4 viruses were sensitive to the CXCR4-specific inhibitor, AMD3100. The five X4 or R5X4 viruses were all able to replicate in peripheral blood mononuclear cells that did not express CCR5. When tested using coreceptor-transfected cell lines, one R5 virus was also able to use CXCR6, and another R5X4 virus could use CCR3, BOB/GPR15, and CXCR6. The R5X4 and X4 viruses contained more-diverse V3 loop sequences, with a higher overall positive charge, than the R5 viruses. Hence, some HIV-1 subtype C viruses are able to use CCR5, CXCR4, or both CXCR4 and CCR5 for entry, and they are sensitive to specific inhibitors of entry via these coreceptors. These observations are relevant to understanding the rapid spread of HIV-1 subtype C in the developing world and to the design of intervention and treatment strategies.

Indexed as

Acquired Immunodeficiency SyndromeAdultAmino Acid SequenceAntibodies, MonoclonalAntibodies, Monoclonal, HumanizedAnti-HIV AgentsBenzylaminesCCR5 Receptor AntagonistsCell LineChemokine CCL5CyclamsFemaleHeterocyclic CompoundsHIV-1HIV AntibodiesHIV Envelope Protein gp120Antibodies, MonoclonalAntibodies, Monoclonal, HumanizedAnti-HIV AgentsBenzylaminesCCR5 Receptor AntagonistsChemokine CCL5CyclamsHeterocyclic CompoundsHIV AntibodiesHIV Envelope Protein gp120HIV envelope protein gp120 (305-321)leronlimabPeptide FragmentsplerixaforReceptors, CCR5Receptors, CXCR4Receptors, HIV

Identifiers

PMID12634405
PMCPMC150635
OpenAlexW2097125607

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.