Evidence map›Paper›PMID 12634120›Full record

ReviewEnvironmental health perspectives2002

Application of genomics to toxicology research.

Russell S Thomas, David R Rank, Sharron G Penn, Gina M Zastrow, Kevin R Hayes, Tianhua Hu, Kalyan Pande, Mark Lewis, Stevan B Jovanovich, Christopher A Bradfield

Abstract readReview
In one paragraph

Review in Environmental health perspectives, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. New "Omics" Approaches as Tools to Explore Mechanistic Nanotoxicology.Advances in experimental medicine and biology · 2022
    Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Database development in toxicogenomics: issues and efforts.Environmental health perspectives · 2004
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Russell S ThomasMcArdle Laboratory for Cancer Research, University of Wisconsin Medical School, Madison, Wisconsin, USA. rthomas@kalypsys.com
David R Rank
Sharron G Penn
Gina M Zastrow
Kevin R Hayes
Tianhua Hu
Kalyan Pande
Mark Lewis
Stevan B Jovanovich
Christopher A Bradfield

Funding

Characterization of the Ah Receptor Signaling PathwayR37ES005703 · NIEHS · UNIVERSITY OF WISCONSIN-MADISON · PI BRADFIELD, CHRISTOPHER A · 2002 to 2011
$4.1M
Biologic Studies with Peroxisome Proliferators and PPARsR01GM023750 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI REDDY, JANARDAN K. · 1985 to 2008
$4.0M
STOREROOM AND MATERIALS ACQUISITION LABORATORYP30CA007175 · NCI · UNIVERSITY OF WISCONSIN MADISON · PI PITOT, JR., HENRY C · 1985 to 2000
$2.4M
MOLECULAR MECHS REGULATING CANCER CELL PROLIFERATIONT32CA009681 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI HOFFMANN, F. MICHAEL · 1993 to 2007
$1.9M
CHARACTERIZATION OF THE AH RECEPTOR SIGNALING PATHWAYR01ES005703 · NIEHS · UNIVERSITY OF WISCONSIN MADISON · PI BRADFIELD, CHRISTOPHER A · 1996 to 2001
$786k
MOLECULAR CLONING OF AH-RECEPTOR POLYMORPHSR29ES005703 · NIEHS · NORTHWESTERN UNIVERSITY · PI BRADFIELD, CHRISTOPHER A · 1991 to 1995
–
BIOLOGICAL STUDIES WITH LIVER PEROXISOME PROLIFERATORSR37GM023750 · NIGMS · NORTHWESTERN UNIVERSITY · PI REDDY, JANARDAN K. · 1987 to 1996
–
NCI NIH HHS CA07175NCI NIH HHS T32CA09681NIEHS NIH HHS ES05703NIEHS NIH HHS R01 ES005703NIGMS NIH HHS GM23750
6 · The paper itself

Abstract

Traditional models of toxicity have relied on dissecting chemical action into pharmacokinetic and pharmacodynamic processes. However, the integration of genomic information with toxicology will enhance our basic understanding of these processes and significantly change the way we apply toxicological information to risk assessment and regulatory problems. In this article, we summarize the application of gene expression information and polymorphism discovery to four areas in toxicology: toxicity testing, cross-species extrapolation, understanding mechanism of action, and susceptibility.

Indexed as

Gene Expression RegulationGenomicsPolymorphism, GeneticAnimalsDisease Models, AnimalEnvironmental PollutantsForecastingHumansOligonucleotide Array Sequence AnalysisToxicity TestsToxicologyEnvironmental Pollutants

Identifiers

PMID12634120
PMCPMC1241273

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.