Evidence map›Paper›PMID 12631735›Full record

ArticleMolecular biology of the cell2003

Tor kinases are in distinct membrane-associated protein complexes in Saccharomyces cerevisiae.

Karen P Wedaman, Aaron Reinke, Scott Anderson, John Yates, J Michael McCaffery, Ted Powers

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 127 papers.

0numbers the graph read from it
0cells of the map it votes in
127citing papers in PubMed
6.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

127 citing papers in PubMed, 234 citations in OpenAlex.

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  20. Analysis of the roles of phosphatidylinositol-4,5-Molecular biology of the cell · 2019
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67 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Karen P WedamanSection of Molecular and Cellular Biology and Center for Genetics and Development, Division of Biological Sciences, University of California, Davis, Davis, California 95616, USA.
Aaron Reinke
Scott Anderson
John Yates
J Michael McCaffery
Ted Powers
University of California, Davis · USScripps Research Institute · USJohns Hopkins University · US

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI DAVIS, TRACY · 1996 to 2011
$24.7M
NCRR NIH HHS P41 RR011823NCRR NIH HHS RR-11823
6 · The paper itself

Abstract

Tor1p and Tor2p kinases, targets of the immune-suppressive antibiotic rapamycin, are components of a highly conserved signaling network that couples nutrient availability and cell growth. To gain insight into the molecular basis underlying Tor-dependent signaling, we used cell fractionation and immunoaffinity chromatography to examine the physical environment of Tor2p. We found that the majority of Tor2p associates with a membrane-bound compartment along with at least four other proteins, Avo1p-Avo3p and Lst8p. Using immunogold electron microscopy, we observed that Tor2p, as well as Tor1p, localizes in punctate clusters to regions adjacent to the plasma membrane and within the cell interior, often in association with characteristic membranous tracks. Cell fractionation, coimmunoprecipitation, and immunogold electron microscopy experiments confirmed that Lst8 associates with both Tor2p as well as Tor1p at these membranous sites. In contrast, we find that Kog1, the yeast homologue of the mammalian Tor regulatory protein Raptor, interacts preferentially with Tor1p. These findings provide evidence for the existence of Tor signaling complexes that contain distinct as well as overlapping components. That these complexes colocalize to a membrane-bound compartment suggests an intimate relationship between membrane-mediated signaling and Tor activity.

Indexed as

Intracellular Signaling Peptides and ProteinsAnimalsAntifungal AgentsCarrier ProteinsCell Cycle ProteinsCell FractionationCell MembraneDetergentsImmunohistochemistryPhosphatidylinositol 3-KinasesPhosphotransferases (Alcohol Group Acceptor)Saccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionSirolimusAntifungal AgentsCarrier ProteinsCell Cycle ProteinsDetergentsIntracellular Signaling Peptides and ProteinsLST8 protein, S cerevisiaePhosphatidylinositol 3-KinasesPhosphotransferases (Alcohol Group Acceptor)Saccharomyces cerevisiae ProteinsSirolimusTOR1 protein, S cerevisiaeTOR2 protein, S cerevisiae

Identifiers

PMID12631735
PMCPMC151591
OpenAlexW2170633329

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.