Evidence map›Paper›PMID 12629039›Full record

ArticleGenes & development2003

The RAG1 N-terminal domain is an E3 ubiquitin ligase.

Vyacheslav Yurchenko, Zhu Xue, Moshe Sadofsky

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 92 citations in OpenAlex.

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  11. Nucleolar localization of RAG1 modulates V(D)J recombination activity.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
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  18. Role of RAG1 autoubiquitination in V(D)J recombination.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Vyacheslav YurchenkoDepartment of Pathology, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Zhu Xue
Moshe Sadofsky
Albert Einstein College of Medicine · US

Funding

DNA-Binding and Complex Formation by RAG ProteinsR01AI041711 · NIAID · YESHIVA UNIVERSITY · PI SADOFSKY, MOSHE J. · 2001 to 2005
$1.6M
DNA-BINDING AND COMPLEX FORMATION BY RAG PROTEINSR29AI041711 · NIAID · MEDICAL COLLEGE OF GEORGIA (MCG) · PI SADOFSKY, MOSHE J. · 1998 to 2000
$102k
NIAID NIH HHS AI41711NIAID NIH HHS R01 AI041711NIAID NIH HHS R29 AI041711
6 · The paper itself

Abstract

RAG1 and RAG2 initiate V(D)J recombination, which is the assembly of immunoglobulin and T cell receptor genes. The N-terminal region of RAG1 can be deleted, leaving an enzymatic "core" able to catalyze the complete reaction. Here we report that the N-terminal portion of RAG1 has a distinct enzymatic role separate from the rest of the protein. It acts as an E3 ligase in the ubiquitylation of a test substrate and formation of polyubiquitin chains in vitro. This finding suggests a new way in which V(D)J recombination can be regulated and coupled to other aspects of cell physiology.

Indexed as

Ubiquitin-Conjugating EnzymesAnimalsGene RearrangementHomeodomain ProteinsImmunoglobulin Variable RegionLigasesMiceProtein Structure, TertiaryUbiquitin-Protein LigasesHomeodomain ProteinsImmunoglobulin Variable RegionLigasesRAG-1 proteinUBE2C protein, humanUbiquitin-Conjugating EnzymesUbiquitin-Protein Ligases

Identifiers

PMID12629039
PMCPMC196008
OpenAlexW2109602617

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.