Evidence map›Paper›PMID 12615697›Full record

ArticleArteriosclerosis, thrombosis, and vascular biology2003

Suppression subtractive hybridization identifies distinctive expression markers for coronary and internal mammary arteries.

Minghui Qin, Zhaohui Zeng, Jie Zheng, Prediman K Shah, Stephen M Schwartz, Lawrence D Adams, Behrooz G Sharifi

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Arteriosclerosis, thrombosis, and vascular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
  2. Article
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  4. Review
  5. Article
  6. Article
  7. Exercise does not attenuate early CAD progression in a pig model.Medicine and science in sports and exercise · 2012
    Article
  8. Article
  9. Advances in tenascin-C biology.Cellular and molecular life sciences : CMLS · 2011
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Creation, validation, and quantitative analysis of protein expression in vascular tissue microarrays.Cardiovascular pathology : the official journal of the Society for Cardiovascular Pathology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Minghui QinAtherosclerosis Research Center, Division of Cardiology, and Burns and Allen Research Institute, Cedars-Sinai Medical Center, Davis Bldg #1016, 8700 Beverly Blvd, Los Angeles, Calif 90048, USA.
Zhaohui Zeng
Jie Zheng
Prediman K Shah
Stephen M Schwartz
Lawrence D Adams
Behrooz G Sharifi
Cedars-Sinai Medical Center · US

Funding

The Role of Tenascin in Neointimal FormationR01HL050566 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI SHAH, PREDIMAN KRISHAN · 2000 to 2009
$2.7M
PTN FUNCTION IN INTIMAL THICKENINGR01HL104068 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI SHAH, PREDIMAN KRISHAN · 2011 to 2014
$1.6M
Directed Vascular Graft Regeneration in the Mouse Peritoneal CavityR01HL090653 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI SHAH, PREDIMAN KRISHAN, SHARIFI, BEHROOZ G · 2008 to 2011
$1.6M
REGULATION OF TENASCIN SYNTHESIS BY CHEMOTACTIC FACTORSR29HL050566 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI SHARIFI, BEHROOZ G · 1995 to 1998
–
NHLBI NIH HHS HL50566NHLBI NIH HHS R01 HL050566NHLBI NIH HHS R01 HL090653NHLBI NIH HHS R01 HL104068NHLBI NIH HHS R29 HL050566
6 · The paper itself

Abstract

objectiveWe sought to identify differentially expressed genes in the athero-prone coronary artery and athero-resistant internal mammary arteries. METHODS AND

resultsUsing suppressive subtraction hybridization, we generated reciprocal cDNA collections of representative mRNAs specific to porcine coronary arteries versus porcine mammary arteries. We screened 1000 suppressive subtraction hybridization cDNA clones by dot blot array and sequenced 600 of those showing the most marked expression differences. Northern blot, in situ hybridization, and immunostaining confirmed the differential gene expression patterns identified by the dot blot arrays. Genes associated with mammary arteries included claudin-10 and h-cadherin, which are genes associated with tight junctions and intermediate junctions. In contrast, genes associated with proatherosclerotic processes, such as lipid retention and metabolism, inflammation, and cell growth, were preferentially expressed in coronary arteries.

conclusionsNormal coronary arteries have gene expression program that is significantly different than internal mammary arteries. These differences may partly explain the resistance of coronary arteries and internal mammary arteries to atherosclerosis.

Indexed as

Gene ExpressionAnimalsArteriosclerosisBlotting, NorthernCadherinsCaveolin 1CaveolinsClaudinsCoronary VesselsDNA, ComplementaryDNA ProbesImmunoblottingIn Vitro TechniquesMammary ArteriesMembrane ProteinsReference ValuesangiogeninCadherinsCaveolin 1Caveolinsclaudin 10ClaudinsDNA, ComplementaryDNA ProbesH-cadherinMembrane ProteinsRibonuclease, PancreaticTenascin

Identifiers

PMID12615697
PMCPMC3579564
OpenAlexW2117684060

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.