Evidence map›Paper›PMID 12612605›Full record

ArticleEMBO reports2003

A novel, inducible, eukaryotic gene expression system based on the quorum-sensing transcription factor TraR.

Petra Neddermann, Cesare Gargioli, Ester Muraglia, Sonia Sambucini, Fabio Bonelli, Raffaele De Francesco, Riccardo Cortese

Erratum issuedAbstract read
In one paragraph

Article in EMBO reports, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Engineering Gene Circuits for Mammalian Cell-Based Applications.Cold Spring Harbor perspectives in biology · 2016
    Review
  8. Article
  9. Mammalian synthetic biology: emerging medical applications.Journal of the Royal Society, Interface · 2015
    Review
  10. Article
  11. Article
  12. Rapidly reversible manipulation of molecular activity with dual chemical dimerizers.Angewandte Chemie (International ed. in English) · 2013
    Article
  13. Article
  14. Article
  15. Synthetic biology: applications come of age.Nature reviews. Genetics · 2010
    Review
  16. Controlling transgene expression in subcutaneous implants using a skin lotion containing the apple metabolite phloretin.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  17. Article
  18. Article
  19. Article
  20. A structurally unrelated mimic of a Pseudomonas aeruginosa acyl-homoserine lactone quorum-sensing signal.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

7 authors.

Petra NeddermannIstituto di Ricerche di Biologia Molecolare P. Angeletti, Via Pontina Km 30.600, 00040 Pomezia/Roma, Italy. Petra_Neddermann@merck.com
Cesare Gargioli
Ester Muraglia
Sonia Sambucini
Fabio Bonelli
Raffaele De Francesco
Riccardo Cortese

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria adapt their pattern of gene expression in response to a variety of external cues, including fluctuations in population density. This type of bacterial cell-to-cell communication is referred to as quorum-sensing. Quorum-sensing systems are present in many bacterial species and constitute a large collection of ligands and cognate receptors. The availability of such diversity offers interesting opportunities for biotechnological exploitation. We describe here the transformation of the quorum-sensing system of Agrobacterium tumefaciens into a transcription regulatory system that works in mammalian cells. The A. tumefaciens TraR protein was fused to the eukaryotic activation domain of NF-kappaB p65, generating a novel chimaeric transcriptional activator that stimulates gene transcription in different human cell lines from a minimal promoter containing the TraR DNA recognition sequence in the presence of the Agrobacterium quorum-sensing signal molecule N-(3-oxo-octanoyl)homoserine lactone (3-oxo-C(8)-HSL). The basal level of transcription was low in the absence of 3-oxo-C(8)-HSL, and gene expression was stimulated up to 1,000-fold at a saturating concentration of 3-oxo-C(8)-HSL.

Indexed as

Bacterial ProteinsDNAGene ExpressionGene Expression RegulationProtein Structure, TertiaryRecombinant Fusion ProteinsTranscription, GeneticBacterial ProteinsDNARecombinant Fusion ProteinsTraR protein, Agrobacterium tumefaciens

Identifiers

PMID12612605
PMCPMC1315832

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.