Evidence map›Paper›PMID 12612090›Full record

ArticleMolecular and cellular biology2003

mRNA instability in the nucleus due to a novel open reading frame element is a major determinant of the narrow tissue specificity of folate receptor alpha.

Xuan Zheng, Karen Kelley, Hala Elnakat, Wu Yan, Ted Dorn, Manohar Ratnam

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Xuan ZhengDepartment of Biochemistry and Molecular Biology, Medical College of Ohio, 3035 Arlington Avenue, Toledo, OH 43614-5804, USA.
Karen Kelley
Hala Elnakat
Wu Yan
Ted Dorn
Manohar Ratnam
University of Toledo Medical Center · US

Funding

MECHANISMS CONTROLLING EXPRESSION OF NEW TUMOR TARGETSR01CA080183 · NCI · UNIVERSITY OF TOLEDO HEALTH SCI CAMPUS · PI RATNAM, MANOHAR · 1999 to 2009
$1.9M
EXPLORING THE CLINICAL POTENTIAL OF FOLATE RECEPTORSR01CA070873 · NCI · UNIVERSITY OF TOLEDO HEALTH SCI CAMPUS · PI RATNAM, MANOHAR · 1996 to 1998
–
NCI NIH HHS R01 CA080183NCI NIH HHS R01 CA 70873NCI NIH HHS R01 CA 80183
6 · The paper itself

Abstract

The folate receptor type alpha (FR-alpha) is a promising tumor marker and target. Here, we investigate the mechanistic basis for the tumor specificity and vast overexpression of FR-alpha. Among representative FR-alpha-positive (HeLa and JAR) and FR-alpha-negative (MG63, Caki1, and HT3) cell lines, the transcription rates of the endogenous FR-alpha gene, as well as the FR-alpha promoter activity, were relatively weak and comparable, but the FR-alpha transcript was abundant only in total RNA and nuclear RNA from the FR-alpha-positive cells. Rous sarcoma virus (RSV) promoter-driven expression of the FR-alpha gene was 7 to 30 times greater in the FR-alpha-positive than in FR-alpha-negative cells, both at the protein and mRNA levels, independently of intron sequences. Through the use of chimeric FR-alpha/FR-beta cDNAs, the above pattern of FR-alpha expression was attributed to a 60-bp sequence in the FR-alpha open reading frame. This sequence element, when placed in the 5' untranslated region of RSV promoter-luciferase, decreased the reporter expression approximately 7- to 20-fold in FR-alpha-negative cells (MG63, Caki1, HT3, BG1, and MCF7) relative to FR-alpha-positive cells (HeLa, JAR, and JEG3). Substitution of this FR-alpha element in FR-beta increased the in vivo degradation rate of the transcript in the nuclei of MG63 cells but not in the nuclei of HeLa cells or in the cytosol of MG63 or HeLa cells. The results reveal an efficient mechanism by which a novel sequence element causes differential transcript degradation in the nucleus to ensure narrow tissue specificity for a gene (e.g., that for FR-alpha) whose transcription is weak and relatively nonselective. FR-alpha exhibited constitutive mRNA and protein synthesis during the cell cycle and a slow protein turnover, presumably ensuring a high steady-state level of the receptor in cells that could override the nuclear mRNA instability determinant.

Indexed as

Receptors, Cell SurfaceRegulatory Sequences, Nucleic AcidRNA Processing, Post-Transcriptional5' Untranslated RegionsAvian Sarcoma VirusesCarrier ProteinsCell CycleCell NucleusChoriocarcinomaDNA, ComplementaryFemaleFolate Receptors, GPI-AnchoredFolic AcidGene Expression Regulation, NeoplasticGenes, ReporterGenes, Synthetic5' Untranslated RegionsCarrier ProteinsDNA, ComplementaryFolate Receptors, GPI-AnchoredFolic AcidLuciferasesNeoplasm ProteinsReceptors, Cell SurfaceRecombinant Fusion ProteinsRNA, MessengerRNA, Neoplasm

Identifiers

PMID12612090
PMCPMC149483
OpenAlexW2156806290

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.