Evidence map›Paper›PMID 12609854›Full record

ArticleBiophysical journal2003

Integrated luminal and cytosolic aspects of the calcium release control.

Irina Baran

Open access · bronzeAbstract readComparative StudyEvaluation StudyValidation Study
In one paragraph

Article in Biophysical journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Irina BaranBiophysics Department, Faculty of Medicine, Carol Davila University of Medicine and Pharmacology, 76241 Bucharest, Romania. baran@theorl.theory.nipine.ro
Carol Davila University of Medicine and Pharmacy · RO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We propose here a unitary approach to the luminal and cytosolic control of calcium release. A minimal number of model elements that realistically describe different data sets are combined and adapted to correctly respond to various physiological constraints. We couple the kinetic properties of the inositol 1,4,5 trisphosphate receptor/calcium channel with the dynamics of Ca(2+) and K(+) in both the lumen and cytosol, and by using a detailed simulation approach, we propose that local (on a radial distance approximately 2 micro m) calcium oscillations in permeabilized cells are driven by the slow inactivation of channels organized in discrete clusters composed of between six and 15 channels. Moreover, the character of these oscillations is found to be extremely sensitive to K(+), so that the cytosolic and luminal calcium variations are in or out of phase if the store at equilibrium has tens or hundreds micro M Ca(2+), respectively, depending on the K(+) gradient across the reticulum membrane. Different patterns of calcium signals can be reproduced through variation of only a few parameters.

Indexed as

Models, BiologicalBiological Transport, ActiveCalciumCalcium ChannelsCalcium SignalingComputer SimulationCytosolEndoplasmic ReticulumHomeostasisInositol 1,4,5-Trisphosphate ReceptorsIon Channel GatingModels, ChemicalPorosityPotassiumReceptors, Cytoplasmic and NuclearCalciumCalcium ChannelsInositol 1,4,5-Trisphosphate ReceptorsPotassiumReceptors, Cytoplasmic and Nuclear

Identifiers

PMID12609854
PMCPMC1302721
OpenAlexW2090711666

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.