Evidence map›Paper›PMID 12602870›Full record

ArticlePlant molecular biology2003

A maize histone deacetylase and retinoblastoma-related protein physically interact and cooperate in repressing gene transcription.

Vincenzo Rossi, Sabrina Locatelli, Chiara Lanzanova, M Beatrice Boniotti, Serena Varotto, Alexandra Pipal, Maria Goralik-Schramel, Alexandra Lusser, Christiane Gatz, Crisanto Gutierrez and 1 more

Abstract read
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In one paragraph

Article in Plant molecular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 77 citations in OpenAlex.

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  8. Characterization and Expression Analysis of Common BeanInternational journal of genomics · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 4 countries.

Vincenzo RossiIstituto Sperimentale per la Cerealicoltura, Sez. Bergamo, Via Stezzano 24, 24126 Bergamo, Italy. rossi@iscbg.it
Sabrina Locatelli
Chiara Lanzanova
M Beatrice Boniotti
Serena Varotto
Alexandra Pipal
Maria Goralik-Schramel
Alexandra Lusser
Christiane Gatz
Crisanto Gutierrez
Mario Motto
Istituto Sperimentale per la Zootecnia · ITUniversidad Autónoma de Madrid · ESUniversität Innsbruck · ATInnsbruck Medical University · ATUniversity of Göttingen · DEUniversity of Padua · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In mammalian cells the product of the human retinoblastoma tumour suppressor gene (pRb) can recruit Rpd3-like histone deacetylases to repress transcription. In this study, we investigated whether this mechanism might also be relevant in plants and found both conserved and distinct features. The expression profiles of the Zea mays Rpd3-type histone deacetylase (ZmRpd3I) and the retinoblastoma-related (ZmRBR1) homologues were analysed during endosperm development. GST pull-down and immunoprecipitation experiments showed a physical interaction between ZmRBRI and ZmRpd3I. Because ZmRpd3I lacks a LXCXE motif, conserved in several pRb-interacting proteins, we have mapped the amino acid domains involved in the ZmRBR1/ZmRpd3I interaction. Furthermore, we observed that ZmRbAp1, a maize member of the MSI/RbAp family, facilitated this protein interaction. Co-transformations of tobacco protoplasts with plasmids expressing ZmRBRI and ZmRpd3I showed that the two proteins cooperate in repressing gene transcription. Our findings represent the first indication that in plants a regulator of important biological processes, ZmRBRI, can recruit a histone deacetylase, ZmRpd3I, to control gene transcription.

Indexed as

Chromosomal Proteins, Non-HistoneBinding SitesCarrier ProteinsCell Cycle ProteinsCells, CulturedGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGlutathione TransferaseHistone DeacetylasesImmunoblottingIn Situ HybridizationPlant ProteinsProtein BindingRecombinant Fusion ProteinsSeedsTranscription, GeneticCarrier ProteinsCell Cycle ProteinsChromosomal Proteins, Non-HistoneGlutathione TransferaseHistone DeacetylasesPlant ProteinsRbAp1 protein, Zea maysRecombinant Fusion ProteinsRRB1 protein, Zea mays

Identifiers

PMID12602870
OpenAlexW314352892

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.