Evidence map›Paper›PMID 12601469›Full record

ArticleHuman genetics2003

Genetic demography of Antioquia (Colombia) and the Central Valley of Costa Rica.

Luis G Carvajal-Carmona, Roel Ophoff, Susan Service, Jaana Hartiala, Julio Molina, Pedro Leon, Jorge Ospina, Gabriel Bedoya, Nelson Freimer, Andrés Ruiz-Linares

Abstract read
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In one paragraph

Article in Human genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed.

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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Luis G Carvajal-CarmonaThe Galton Laboratory, Department of Biology (Wolfson House), University College London, UK.
Roel Ophoff
Susan Service
Jaana Hartiala
Julio Molina
Pedro Leon
Jorge Ospina
Gabriel Bedoya
Nelson Freimer
Andrés Ruiz-Linares

Funding

POPULATION GENETIC MAPPING OF TOURETTE SYNDROMER01NS037484 · NINDS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI FREIMER, NELSON B. · 1998 to 2009
$4.0M
GENETIC &EPIDEMIOLOGIC STUDIES OF BIPOLAR DISORDERR01MH049499 · NIMH · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI FREIMER, NELSON B · 1992 to 2006
$2.9M
MOLECULAR AND POPULATION GENETICS OF BIPOLAR DISORDERK02MH001375 · NIMH · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI FREIMER, NELSON B · 1996 to 2005
$675k
NIMH NIH HHS K02MH01375NIMH NIH HHS R01MH49499NINDS NIH HHS R01NS37484
6 · The paper itself

Abstract

We report a comparative genetic characterization of two population isolates with parallel demographic histories: the Central Valley of Costa Rica (CVCR) and Antioquia (in northwest Colombia). The analysis of mtDNA, Y-chromosome and autosomal polymorphisms shows that Antioquia and the CVCR are genetically very similar, indicating that closely related parental populations founded these two isolates. In both populations, the male ancestry is predominantly European, whereas the female ancestry is mostly Amerind. In agreement with their isolation, the Amerindian mtDNA diversity of Antioquia and the CVCR is typical of ethnically-defined native populations and is markedly lower than in other Latin American populations. A comparison of linkage disequilibrium (LD) at 18 marker pairs in Antioquia and the CVCR shows that markers in LD in both populations are located at short genetic distances (<approximately 1 cM), whereas markers separated by greater distances are in LD only in the CVCR. This difference probably reflects stochastic variation of LD at the limited number of genome regions compared. The genetic similarity of the populations from Antioquia and the CVCR together with differences in LD between them should be exploitable for the identification and fine mapping of shared disease-related gene variants.

Indexed as

DemographyGenetics, PopulationColombiaCosta RicaFemaleGenetic VariationHumansIndians, North AmericanLinkage DisequilibriumMale

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.