Evidence map›Paper›PMID 12598654›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

Crystal structure of the retinoblastoma tumor suppressor protein bound to E2F and the molecular basis of its regulation.

Bing Xiao, James Spencer, Adrienne Clements, Nadeem Ali-Khan, Sibylle Mittnacht, Cristina Broceño, Manfred Burghammer, Anastassis Perrakis, Ronen Marmorstein, Steven J Gamblin

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 162 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. One hotspotFrontiers in oncology · 2026
    Article
  5. Review
  6. Article
  7. Article
  8. Exploring treatment options in cancer: Tumor treatment strategies.Signal transduction and targeted therapy · 2024
    Review
  9. Article
  10. Review
  11. Emerging New Therapeutics for Retinoblastoma.Ocular oncology and pathology · 2022
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Review

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Bing XiaoDivision of Protein Structure, National Institute for Medical Research, Mill Hill, London NW7 1AA, United Kingdom.
James Spencer
Adrienne Clements
Nadeem Ali-Khan
Sibylle Mittnacht
Cristina Broceño
Manfred Burghammer
Anastassis Perrakis
Ronen Marmorstein
Steven J Gamblin
Institute of Cancer Research · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The retinoblastoma tumor suppressor protein (pRb) regulates the cell cycle, facilitates differentiation, and restrains apoptosis. Furthermore, dysfunctional pRb is thought to be involved in the development of most human malignancies. Many of the functions of pRb are mediated by its regulation of the E2F transcription factors. To understand the structural basis for this regulation, we have determined the crystal structure of a fragment of E2F in complex with the pocket domain of the tumor suppressor protein. The pRb pocket, comprising the A and B cyclin-like domains, is the major focus of tumourigenic mutations in the protein. The fragment of E2F used in our structural studies, residues 409-426 of E2F-1, represents the core of the pRb-binding region of the transcription factor. The structure shows that E2F binds at the interface of the A and B domains of the pocket making extensive interactions with conserved residues from both. We show by solution studies that a second site, probably contained within the "marked box" region of E2F, is responsible for additional interactions with the pRb pocket but is insufficient for complex formation on its own. In addition, we show that the interaction of the core binding fragment of E2F with pRb is inhibited by phosphorylation of the tumor suppressor protein by CDK2cyclin DE. Finally, our data reveal that the tight binding of the human papillomavirus E7 oncoprotein to pRb prevents subsequent interactions with the marked box region of E2F but not with its core binding region.

Indexed as

CDC2-CDC28 KinasesCell Cycle ProteinsDNA-Binding ProteinsBlotting, WesternCalorimetryCrystallography, X-RayCyclin DCyclin-Dependent Kinase 2Cyclin-Dependent KinasesCyclin ECyclinsE2F1 Transcription FactorE2F Transcription FactorsEscherichia coliGlutathione TransferaseHumansCDC2-CDC28 KinasesCDK2 protein, humanCell Cycle ProteinsCyclin DCyclin-Dependent Kinase 2Cyclin-Dependent KinasesCyclin ECyclinsDNA-Binding ProteinsE2F1 protein, humanE2F1 Transcription FactorE2F Transcription FactorsGlutathione TransferaseProtein Serine-Threonine KinasesRecombinant Fusion ProteinsRetinoblastoma ProteinTranscription Factors

Identifiers

PMID12598654
PMCPMC151346
OpenAlexW2105392270

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.