Evidence map›Paper›PMID 12598368›Full record

ReviewAnnual review of biophysics and biomolecular structure2003

Nucleic acid recognition by OB-fold proteins.

Douglas L Theobald, Rachel M Mitton-Fry, Deborah S Wuttke

Open access · greenAbstract readReview
In one paragraph

Review in Annual review of biophysics and biomolecular structure, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 276 papers.

0numbers the graph read from it
0cells of the map it votes in
276citing papers in PubMed
9.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

276 citing papers in PubMed, 494 citations in OpenAlex.

  1. Article
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  7. RNA-Binding Proteins in Dinoflagellates.International journal of molecular sciences · 2026
    Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
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  14. Article
  15. Article
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  17. Review
  18. Protein Fold Usages in Ribosomes: Another Glance to the Past.International journal of molecular sciences · 2024
    Article
  19. Article
  20. Article

216 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Douglas L TheobaldDepartment of Chemistry and Biochemistry, University of Colorado at Boulder, Boulder, Colorado 80309-0215, USA. theobal@colorado.edu
Rachel M Mitton-Fry
Deborah S Wuttke
University of Colorado Boulder · US

Funding

SINGLE STRANDED DNA RECOGNITION IN TELOMERESR01GM059414 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI WUTTKE, DEBORAH S. · 1999 to 2015
$3.7M
NIGMS NIH HHS GM 59414NIGMS NIH HHS R01 GM059414
6 · The paper itself

Abstract

The OB-fold domain is a compact structural motif frequently used for nucleic acid recognition. Structural comparison of all OB-fold/nucleic acid complexes solved to date confirms the low degree of sequence similarity among members of this family while highlighting several structural sequence determinants common to most of these OB-folds. Loops connecting the secondary structural elements in the OB-fold core are extremely variable in length and in functional detail. However, certain features of ligand binding are conserved among OB-fold complexes, including the location of the binding surface, the polarity of the nucleic acid with respect to the OB-fold, and particular nucleic acid-protein interactions commonly used for recognition of single-stranded and unusually structured nucleic acids. Intriguingly, the observation of shared nucleic acid polarity may shed light on the longstanding question concerning OB-fold origins, indicating that it is unlikely that members of this family arose via convergent evolution.

Indexed as

Models, MolecularProtein FoldingAmino Acid MotifsDNADNA-Binding ProteinsHumansMacromolecular SubstancesOligonucleotidesOligosaccharidesPeptide FragmentsProtein BindingProtein ConformationProteinsProtein Structure, SecondaryProtein Structure, TertiaryRNADNADNA-Binding ProteinsMacromolecular SubstancesOligonucleotidesOligosaccharidesPeptide FragmentsProteinsRNA

Identifiers

PMID12598368
PMCPMC1564333
OpenAlexW2171810840

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.