Evidence map›Paper›PMID 12592396›Full record

ArticleOncogene2003

Mapping of genetic modifiers of thymic lymphoma development in p53-knockout mice.

Yukie Ochiai, Yasushi Tamura, Yuko Saito, Atsushi Matsuki, Yu-Ichi Wakabayashi, Yoshifusa Aizawa, Ohtsura Niwa, Ryo Kominami

Abstract read
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In one paragraph

Article in Oncogene, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Chromosome substitution strains: gene discovery, functional analysis, and systems studies.Mammalian genome : official journal of the International Mammalian Genome Society · 2012
    Review
  3. Article
  4. Mind the gap: analysis of marker-assisted breeding strategies for inbred mouse strains.Mammalian genome : official journal of the International Mammalian Genome Society · 2006
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yukie OchiaiDepartment of Gene Regulation, Graduate School of Medical and Dental Sciences, Niigata University, Asahimachi-doori 1-757, Niigata 951-8122, Japan.
Yasushi Tamura
Yuko Saito
Atsushi Matsuki
Yu-Ichi Wakabayashi
Yoshifusa Aizawa
Ohtsura Niwa
Ryo Kominami
Niigata University · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The strain dependency of the spectrum and latency of tumors has been reported in p53-deficient (KO) mice, suggesting the presence of modifiers for the outcome of the p53 deficiency. The modifiers provide clues to the oncogenic pathway in cells lacking p53, the most frequently mutated gene in a wide variety of human cancers. To search the modifiers, we induced 160 lymphomas and 69 skin tumors by gamma-irradiation of p53(KO/+) backcross mice between BALB/c and MSM strains and performed genome scan. BALB/c-derived alleles at three loci on chromosome 19, Mp53D1 (modifier of p53-deficiency) at D19Mit5, Mp53D2 at D19Mit90 and Mp53D3 at D19Mit123, extended the latency of thymic lymphoma development (P values in Mantel-Cox test were 0.0007, 0.0007 and 0.0003, respectively). Mp53D3 also increased the latency of skin tumors (P value, 0.0008). The linkage of Mp53D2 was confirmed by the experiment using 94 p53-KO mice consomic for chromosome 19, providing a significant linkage. However, the linkage was not confirmed for Mp53D1 or Mp53D3, suggesting epistasis of genes involved in the tumorigenesis.

Indexed as

Epistasis, GeneticGenes, p53AllelesAnimalsChromosome MappingCrosses, GeneticFemaleGamma RaysGenetic HeterogeneityGenetic LinkageGenetic MarkersLymphoma, Non-HodgkinMaleMiceMice, Inbred BALB CMice, Inbred StrainsGenetic Markers

Identifiers

PMID12592396
OpenAlexW2037532035

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.