Evidence map›Paper›PMID 12592004›Full record

ArticleRNA (New York, N.Y.)2003

Absence of transitive and systemic pathways allows cell-specific and isoform-specific RNAi in Drosophila.

Jean-Yves Roignant, Clément Carré, Bruno Mugat, Dimitri Szymczak, Jean-Antoine Lepesant, Christophe Antoniewski

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 251 citations in OpenAlex.

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  7. Loss ofThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
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  10. Structure and expression ofFrontiers in physiology · 2022
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48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jean-Yves RoignantInstitut Jacques Monod, Unité Mixte de Recherche 7592, Centre National de la Recherche Scientifique, Université Paris 6 et Université Paris 7. 75251 Paris cedex 05, France.
Clément Carré
Bruno Mugat
Dimitri Szymczak
Jean-Antoine Lepesant
Christophe Antoniewski
Université Paris Cité · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA interference (RNAi) designates the multistep process by which double-stranded RNA induces the silencing of homologous endogenous genes. Some aspects of RNAi appear to be conserved throughout evolution, including the processing of trigger dsRNAs into small 21-23-bp siRNAs and their use to guide the degradation of complementary mRNAs. Two remarkable features of RNAi were uncovered in plants and Caenorhabditid elegans. First, RNA-dependent RNA polymerase activities allow the synthesis of siRNA complementary to sequences upstream of or downstream from the initial trigger region in the target mRNA, leading to a transitive RNAi with sequences that had not been initially targeted. Secondly, systemic RNAi may cause the targeting of gene silencing in one tissue to spread to other tissues. Using transgenes expressing dsRNA, we investigated whether transitive and systemic RNAi occur in Drosophila. DsRNA-producing transgenes targeted RNAi to specific regions of alternative mRNA species of one gene without transitive effect directed to sequences downstream from or upstream of the initial trigger region. Moreover, specific expression of a dsRNA, using either cell-specific GAL4 drivers or random clonal activation of a GAL4 driver, mediated a cell-autonomous RNAi. Together, our results provide evidence that transitive and systemic aspects of RNAi are not conserved in Drosophila and demonstrate that dsRNA-producing transgenes allow powerful reverse genetic approaches to be conducted in this model organism, by knocking down gene functions at the resolution of a single-cell type and of a single isoform.

Indexed as

RNA InterferenceAnimalsAnimals, Genetically ModifiedDNA ProbesDrosophilaDrosophila ProteinsGene Expression RegulationGreen Fluorescent ProteinsLuminescent ProteinsMicroscopy, ConfocalProtein IsoformsReceptors, SteroidRepetitive Sequences, Nucleic AcidTranscription FactorsTransgenesDNA ProbesDrosophila Proteinsecdysone receptorGreen Fluorescent Proteinslolal protein, DrosophilaLuminescent ProteinsProtein IsoformsReceptors, SteroidTranscription Factors

Identifiers

PMID12592004
PMCPMC1370397
OpenAlexW2114582526

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.