Evidence map›Paper›PMID 12589713›Full record

ArticleBMC molecular biology2003

Viable nonsense mutants for the essential gene SUP45 of Saccharomyces cerevisiae.

Svetlana E Moskalenko, Svetlana V Chabelskaya, Sergei G Inge-Vechtomov, Michel Philippe, Galina A Zhouravleva

Open access · bronzeAbstract read
In one paragraph

Article in BMC molecular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 57 citations in OpenAlex.

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  9. Nonsense Mutations in the YeastInternational journal of molecular sciences · 2020
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Svetlana E MoskalenkoUniversité de Rennes 1, CNRS UMR 6061, IFR 97, France. smoskalenko@hotmail.com
Svetlana V Chabelskaya
Sergei G Inge-Vechtomov
Michel Philippe
Galina A Zhouravleva
St Petersburg University · RUCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTermination of protein synthesis in eukaryotes involves at least two polypeptide release factors (eRFs) - eRF1 and eRF3. The highly conserved translation termination factor eRF1 in Saccharomyces cerevisiae is encoded by the essential gene SUP45.

resultsWe have isolated five sup45-n (n from nonsense) mutations that cause nonsense substitutions in the following amino acid positions of eRF1: Y53 --> UAA, E266 --> UAA, L283 --> UAA, L317 --> UGA, E385 --> UAA. We found that full-length eRF1 protein is present in all mutants, although in decreased amounts. All mutations are situated in a weak termination context. All these sup45-n mutations are viable in different genetic backgrounds, however their viability increases after growth in the absence of wild-type allele. Any of sup45-n mutations result in temperature sensitivity (37 degrees C). Most of the sup45-n mutations lead to decreased spore viability and spores bearing sup45-n mutations are characterized by limited budding after germination leading to formation of microcolonies of 4-20 cells.

conclusionsNonsense mutations in the essential gene SUP45 can be isolated in the absence of tRNA nonsense suppressors.

Indexed as

Peptide Termination FactorsAllelesCodon, NonsenseCodon, TerminatorGenes, EssentialGenes, FungalGenes, LethalMeiosisSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSuppression, GeneticCodon, NonsenseCodon, TerminatorPeptide Termination FactorsSaccharomyces cerevisiae ProteinsSUP45 protein, S cerevisiae

Identifiers

PMID12589713
PMCPMC150568
OpenAlexW1741202577

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.