Evidence map›Paper›PMID 12578989›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

Arabidopsis LEAFY COTYLEDON1 represents a functionally specialized subunit of the CCAAT binding transcription factor.

Hyeseung Lee, Robert L Fischer, Robert B Goldberg, John J Harada

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 112 papers.

0numbers the graph read from it
0cells of the map it votes in
112citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

112 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Cloning ofInternational journal of molecular sciences · 2025
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  6. Genome-Wide Identification ofPlants (Basel, Switzerland) · 2025
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  7. Article
  8. Overexpression of PeonyPlants (Basel, Switzerland) · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Nuclear factor Y-A3b binds to theHorticulture research · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Genetic mapping and functional genomics of soybean seed protein.Molecular breeding : new strategies in plant improvement · 2023
    Article
  18. Genome-Wide Characterization ofInternational journal of molecular sciences · 2022
    Article
  19. Article
  20. Review

52 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Hyeseung LeeSection of Plant Biology, Division of Biological Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA.
Robert L Fischer
Robert B Goldberg
John J Harada

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

LEAFY COTYLEDON1 (LEC1) is a central regulator that is required for many aspects of Arabidopsis embryogenesis and sufficient to induce embryo development in vegetative cells when expressed ectopically. We previously showed that LEC1 encodes an HAP3 subunit of the CCAAT binding factor and that the 10 Arabidopsis HAP3 (AHAP3) subunits can be divided into two classes, the LEC1-type and the non-LEC1-type, based on sequence similarity within their B domains. By analyzing the ability of chimeric HAP3 subunits containing different combinations of domains from LEC1 and a non-LEC1-type AHAP3 subunit to suppress genetically the lec1 mutation, we show that the B domain of LEC1 is necessary and sufficient within the context of the protein for its activity in embryogenesis. Moreover, we identify one amino acid residue, Asp-55, specific to the LEC1-type B domain that is required for LEC1 activity in embryogenesis and sufficient to confer partial LEC1 activity to a non-LEC1-type B domain. Based on structural similarities between the HAP3 B domain and histone fold motif, we discuss how the Asp-55 residue may functionally differentiate LEC1 from the non-LEC1-type AHAP3 subunits.

Indexed as

Arabidopsis ProteinsAmino Acid SequenceArabidopsisBase SequenceCCAAT-Enhancer-Binding ProteinsDNA PrimersMolecular Sequence DataPlant ProteinsSequence Homology, Amino AcidTranscription FactorsArabidopsis ProteinsCCAAT-Enhancer-Binding ProteinsDNA PrimersLEC1 protein, ArabidopsisPlant ProteinsTranscription Factors

Identifiers

PMID12578989
PMCPMC149974

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.