Evidence map›Paper›PMID 12574501›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

Inhibition of herpes simplex virus 1 gene expression by designer zinc-finger transcription factors.

Monika Papworth, Michael Moore, Mark Isalan, Michal Minczuk, Yen Choo, Aaron Klug

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Recent developments and applications of genetic transformation and genome editing technologies in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  5. Genome-Editing Technologies: Principles and Applications.Cold Spring Harbor perspectives in biology · 2016
    Review
  6. Article
  7. Review
  8. Zinc-finger nucleases as a novel therapeutic strategy for targeting hepatitis B virus DNAs.Molecular therapy : the journal of the American Society of Gene Therapy · 2010
    Article
  9. Article
  10. Article
  11. Targeted inhibition of Snail family zinc finger transcription factors by oligonucleotide-Co(III) Schiff base conjugate.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  12. Synthesis of programmable integrases.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Sequence-specific modification of mitochondrial DNA using a chimeric zinc finger methylase.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Monika PapworthMedical Research Council Laboratory of Molecular Biology, Hills Road, Cambridge CB2 2QH, United Kingdom. map@mrc-lmb.cam.ac.uk
Michael Moore
Mark Isalan
Michal Minczuk
Yen Choo
Aaron Klug
Medical Research Council · GBMRC Laboratory of Molecular Biology · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The herpes simplex virus 1 (HSV-1) replicative cycle begins by binding of the viral activator, VP16, to a set of sequences in the immediate-early (IE) gene promoters. With the aim of inhibiting this cycle, we have constructed a number of synthetic zinc-finger DNA-binding peptides by using recently reported methods. Peptides containing either three or six fingers, targeted to a viral promoter, were engineered as fusions with a KOX-1 transcription repression domain. These proteins bound to the HSV-1 IE175k (ICP4) promoter, in vitro, with nanomolar or subnanomolar binding affinity. However, in a chloramphenicol acetyltransferase reporter system, only the six-finger protein was found to repress VP16-activated transcription significantly. Thus the longer array of zinc fingers is required to compete successfully against VP16, one of the most powerful natural activators known. We found that the HSV-1 replication cycle can be partially repressed by the six-finger peptide with the viral titer reduced by 90%.

Indexed as

Zinc FingersAnimalsBase SequenceChloramphenicol O-AcetyltransferaseCOS CellsDNA PrimersFluorescent Antibody TechniqueGene Expression Regulation, ViralGenes, ViralHeLa CellsHumansSimplexvirusTranscription FactorsChloramphenicol O-AcetyltransferaseDNA PrimersTranscription Factors

Identifiers

PMID12574501
PMCPMC149882
OpenAlexW2167186493

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.