Evidence map›Paper›PMID 12574242›Full record

ArticleJournal of clinical microbiology2003

PCR assay for identification of histoplasma capsulatum based on the nucleotide sequence of the M antigen.

Herbert Leonel de Matos Guedes, Allan Jefferson Guimarães, Mauro de Medeiros Muniz, Claudia Vera Pizzini, Andrew John Hamilton, José Mauro Peralta, George S Deepe, Rosely M Zancopé-Oliveira

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Molecular Diagnosis of Endemic Mycoses.Journal of fungi (Basel, Switzerland) · 2022
    Review
  6. Article
  7. Article
  8. The global epidemiology of emergingStudies in mycology · 2020
    Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Detection ofThe American journal of tropical medicine and hygiene · 2018
    Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Herbert Leonel de Matos GuedesInstituto de Pesquisa Clínica Evandro Chagas, FIOCRUZ, Rio de Janeiro, Brazil.
Allan Jefferson Guimarães
Mauro de Medeiros Muniz
Claudia Vera Pizzini
Andrew John Hamilton
José Mauro Peralta
George S Deepe
Rosely M Zancopé-Oliveira
Fundação Oswaldo Cruz · BRInstituto Evandro Chagas · BRKing's College London · GBUniversidade Federal do Rio de Janeiro · BRUniversity of Cincinnati Medical Center · US

Funding

Wellcome Trust
6 · The paper itself

Abstract

The major diagnostic antigens of Histoplasma capsulatum var. capsulatum are the H and M antigens, pluripotent glycoproteins that elicit both humoral and T-cell-mediated immune responses. The gene encoding the M antigen has previously been sequenced, and its sequence has significant overall homology to those of the genes for fungal catalases. Regions of the M-antigen gene with little or no homology were used to design four oligonucleotide sequences for application in the PCR detection and identification of H. capsulatum var. capsulatum. The PCR correctly identified the 31 H. capsulatum var. capsulatum strains isolated from human, animal, and soil specimens and 1 H. capsulatum var. duboisii isolate. PCR products of 111 and 279 bp were amplified with primers Msp1F-Msp1R and Msp2F-Msp2R, respectively. No amplification product was obtained from DNA extracted from an H. capsulatum var. farciminosum isolate. The specificity of the PCR with the M-antigen-derived primers was confirmed by the total absence of amplification products when genomic DNA from Paracoccidioides brasiliensis, Candida spp., Sporothrix schenckii, Cryptococcus neoformans, Blastomyces dermatitidis, Coccidioides immitis, Aspergillus niger, and Aspergillus fumigatus were applied in the reaction. This rapid, sensitive, and specific assay provides a way to identify typical and atypical isolates of H. capsulatum var. capsulatum.

Indexed as

Antigens, FungalDNA, FungalGlycoproteinsHistoplasmaHumansPolymerase Chain ReactionAntigens, FungalDNA, FungalGlycoproteinsM antigen, Ajellomyces capsulatus

Identifiers

PMID12574242
PMCPMC149724
OpenAlexW2074264695

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.