Evidence map›Paper›PMID 12571035›Full record

ArticleApplied and environmental microbiology2003

Small, acid-soluble proteins as biomarkers in mass spectrometry analysis of Bacillus spores.

Yetrib Hathout, Barbara Setlow, Rosa-Martha Cabrera-Martinez, Catherine Fenselau, Peter Setlow

Erratum issuedAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. TrackingACS omega · 2026
    Review
  2. Article
  3. Article
  4. Microwave supported hydrolysis preparesInternational journal of mass spectrometry · 2019
    Article
  5. Frontiers in microbiology · 2019
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Parameters contributing to efficient ion generation in aerosol MALDI mass spectrometry.Journal of the American Society for Mass Spectrometry · 2008
    Article
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors.

Yetrib HathoutDepartment of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20704, USA. hathout@wam.umd.edu
Barbara Setlow
Rosa-Martha Cabrera-Martinez
Catherine Fenselau
Peter Setlow

Funding

Ubiquitinated Proteins in Exosomes of Immune Suppressive Myeloid CellsR01GM021248 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI FENSELAU, CATHERINE C, FUSHMAN, DAVID · 1985 to 2017
$4.6M
DEGRADATION REACTIONS IN SPORE GERMINATIONR01GM019698 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI SETLOW, PETER · 1985 to 2007
$1.9M
DEGRADATION REACTIONS IN SPORE GERMINATIONR37GM019698 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI SETLOW, PETER · 1994 to 2003
$1.7M
APPLICATIONS OF MASS SPECTROMETRY IN PHARMACOLOGYR37GM021248 · NIGMS · UNIVERSITY OF MARYLAND COLLEGE PK CAMPUS · PI FENSELAU, CATHERINE C. · 1992 to 2001
$438k
NIGMS NIH HHS GM19698NIGMS NIH HHS GM21248NIGMS NIH HHS R01 GM019698NIGMS NIH HHS R01 GM021248NIGMS NIH HHS R37 GM019698NIGMS NIH HHS R37 GM021248
6 · The paper itself

Abstract

The use of 1 N HCl for extraction of small, acid-soluble proteins (SASP) from different Bacillus spore species was examined. The extracts were analyzed by high-performance liquid chromatography and matrix-assisted laser desorption mass spectrometry and were found to be both qualitatively and quantitatively superior to extraction by acetonitrile-5% trifluoroacetic acid (70:30, vol/vol). Both major and minor alpha/beta- and gamma-type SASP were characterized by their molecular masses or tryptic peptide maps and by searches of both protein and unannotated genome databases. For all but 1 pair (B. cereus T and B. thuringiensis subsp. Kurstaki) among the 11 variants studied the suites of SASP masses are distinctive, consistent with the use of these proteins as potential biomarkers for spore identification by mass spectrometry.

Indexed as

Amino Acid SequenceBacillusBacterial ProteinsBiomarkersMolecular Sequence DataSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationSpores, BacterialBacterial ProteinsBiomarkers

Identifiers

PMID12571035
PMCPMC143666

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.