Evidence map›Paper›PMID 12569359›Full record

ArticleOncogene2003

The twist gene is a common target of retroviral integration and transcriptional deregulation in experimental nephroblastoma.

Petr Pajer, Vladimír Pecenka, Vít Karafiát, Jarmila Králová, Zuzana Horejsí, Michal Dvorák

Abstract read
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In one paragraph

Article in Oncogene, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 33 citations in OpenAlex.

  1. Balkan journal of medical genetics : BJMG · 2019
    Article
  2. Journal of virology · 2017
    Article
  3. Article
  4. Cancer gene discovery: exploiting insertional mutagenesis.Molecular cancer research : MCR · 2013
    Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Petr PajerInstitute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague.
Vladimír Pecenka
Vít Karafiát
Jarmila Králová
Zuzana Horejsí
Michal Dvorák
Czech Academy of Sciences, Institute of Molecular Genetics · CZCzech Academy of Sciences · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genes involved in the transformation of kidney blastema cells were searched for in avian nephroblastomas induced by the MAV2 retrovirus. The twist gene was identified as a common site of provirus integration in tumor cells. Twist was rearranged by the MAV2 provirus in three out of 76 independent nephroblastoma samples. The MAV2 integration sites were localized within 40 nucleotides of the twist 5'UTR region, right upstream from the ATG initiation codon. The integrated proviruses were deleted at their 5'ends. As a consequence, twist transcription became controlled by the retroviral 3'LTR promoter and was strongly upregulated, more than 200 times. In addition, 2-100 times elevated twist transcription was also detected in the majority of other nephroblastoma samples not containing MAV2 in the twist locus. We propose that chicken nephroblastoma originates from a single blastemic cell in which the MAV retrovirus, through its integration, has deregulated specific combinations of genes controlling proliferation and differentiation. The activation of the twist gene expression appears to contribute to tumorigenesis, as there is an in vivo positive selection of tumor cell clones containing the twist gene hyperactivated by MAV2 sequences inserted within the twist promoter.

Indexed as

Transcription Factors5' Untranslated RegionsAnimalsChick EmbryoChickensCloning, MolecularGene Expression Regulation, NeoplasticGene Expression Regulation, ViralNuclear ProteinsPolymerase Chain ReactionPromoter Regions, GeneticRetroviridaeTranscription, GeneticTwist-Related Protein 1Up-RegulationVirus Integration5' Untranslated RegionsNuclear ProteinsTranscription FactorsTwist-Related Protein 1

Identifiers

PMID12569359
OpenAlexW2061904421

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.