Evidence map›Paper›PMID 12556495›Full record

ArticleMolecular and cellular biology2003

Signal-induced transcriptional activation by Dif requires the dTRAP80 mediator module.

Jin Mo Park, Jung Mo Kim, Lark Kyun Kim, Se Nyun Kim, Jeongsil Kim-Ha, Jung Hoe Kim, Young-Joon Kim

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

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  16. MED16 and MED23 of Mediator are coactivators of lipopolysaccharide- and heat-shock-induced transcriptional activators.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
  17. The Mediator complex and transcription regulation.Critical reviews in biochemistry and molecular biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Jin Mo ParkDepartment of Biochemistry, National Creative Research Initiative Center for Genome Regulation, Yonsei University. Digital Genomics, Inc., Seoul 120-749, Korea.
Jung Mo Kim
Lark Kyun Kim
Se Nyun Kim
Jeongsil Kim-Ha
Jung Hoe Kim
Young-Joon Kim
Yonsei University · KRKorea Advanced Institute of Science and Technology · KRSejong University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Mediator complex is the major multiprotein transcriptional coactivator complex in Drosophila melanogaster. Mediator components interact with diverse sets of transcriptional activator proteins to elicit the sophisticated regulation of gene expression. The distinct phenotypes associated with certain mutations in some of the Mediator genes and the specific in vitro interactions of Mediator gene products with transcriptional activator proteins suggest the presence of activator-specific binding subunits within the Mediator complex. However, the physiological relevance of these selective in vitro interactions has not been addressed. Therefore, we analyzed dTRAP80, one of the putative activator-binding subunits of the Mediator, for specificity of binding to a number of natural transcriptional activators from Drosophila. Among the group of activator proteins that requires the Mediator complex for transcriptional activation, only a subset of these proteins interacted with dTRAP80 in vitro and only these dTRAP80-interacting activators were defective for activation under dTRAP80-deficient in vivo conditions. In particular, activation of Drosophila antimicrobial peptide drosomycin gene expression by the NF-kappa B-like transcription factor Dif during induction of the Toll signaling pathway was dependent on the dTRAP80 module. These results, and the indirect support from the dTRAP80 artificial recruitment assay, indicate that dTRAP80 serves as a genuine activator-binding target responsible for a distinct group of activators.

Indexed as

AnimalsCarrier ProteinsCell LineCells, CulturedDNA-Binding ProteinsDrosophila ProteinsHomeodomain ProteinsHSP70 Heat-Shock ProteinsMediator ComplexPromoter Regions, GeneticProtein Structure, TertiaryReceptors, Cell SurfaceRecombinant ProteinsRNA, Double-StrandedSignal TransductionToll-Like Receptorsbcd protein, DrosophilaCarrier ProteinsDif protein, DrosophilaDNA-Binding ProteinsDrosophila ProteinsHomeodomain ProteinsHSP70 Heat-Shock ProteinsMED17 protein, DrosophilaMediator ComplexReceptors, Cell SurfaceRecombinant ProteinsRNA, Double-StrandedTl protein, DrosophilaToll-Like ReceptorsTrans-ActivatorsTranscription Factors

Identifiers

PMID12556495
PMCPMC141132
OpenAlexW2149646477

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.