Evidence map›Paper›PMID 12552083›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

Small ubiquitin-related modifier-1 modification mediates resolution of CREB-dependent responses to hypoxia.

Katrina M Comerford, Martin O Leonard, Jorn Karhausen, Robyn Carey, Sean P Colgan, Cormac T Taylor

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 183 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Multi-faceted regulation of CREB family transcription factors.Frontiers in molecular neuroscience · 2024
    Review
  6. Review
  7. Review
  8. Review
  9. The effect of HIF on metabolism and immunity.Nature reviews. Nephrology · 2022
    Review
  10. Article
  11. Article
  12. Natural Products Against Renal FibrosisFrontiers in pharmacology · 2022
    Review
  13. CREB1ACS omega · 2021
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. What turns CREB on? And off? And why does it matter?Cellular and molecular life sciences : CMLS · 2020
    Review

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Katrina M ComerfordThe Conway Institute for Biomolecular and Biomedical Research, University College, Dublin, D4 Ireland.
Martin O Leonard
Jorn Karhausen
Robyn Carey
Sean P Colgan
Cormac T Taylor
Brigham and Women's Hospital · USUniversity College Dublin · IE

Funding

Novel anti-inflamatory lipid mediatorsP01DE013499 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SERHAN, CHARLES NICHOLAS · 2000 to 2004
$5.3M
ROLE OF EPITHELIA IN ISCHEMIA/REPERFUSION INJURYR01DK050189 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI COLGAN, SEAN P · 2000 to 2024
$5.0M
Hypoxia, HIF, and Mucosal InflammationR37DK050189 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI COLGAN, SEAN P · 2010 to 2019
$4.1M
Neutrophils and Vascular Endothelial PermeabilityR01HL060569 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI COLGAN, SEAN P · 1999 to 2013
$3.5M
EOSINOPHIL PROTEINS AND GASTROINTESTINAL DISEASEK08DK002564 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI FURUTA, GLENN T · 1998 to 2003
$392k
CAMP-RESPONSIVE GENES IN INTESTINAL EPITHELIAL HYPOXIAK01DK002682 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI TAYLOR, CORMAC T · 1999 to 2000
$87k
EPITHELIA AND ISCHEMIA/REPERFUSION INJURYR29DK050189 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI COLGAN, SEAN P · 1995 to 1999
–
NHLBI NIH HHS HL60569NHLBI NIH HHS R01 HL060569NIDCR NIH HHS DE13499NIDCR NIH HHS P01 DE013499NIDDK NIH HHS DK02564NIDDK NIH HHS DK02682NIDDK NIH HHS DK50189NIDDK NIH HHS R01 DK050189NIDDK NIH HHS R29 DK050189NIDDK NIH HHS R37 DK050189Wellcome Trust
6 · The paper itself

Abstract

Phosphorylation-dependent ubiquitination combined with proteasomal degradation of transcriptional regulators is a recently appreciated mechanism for control of a number of inflammatory genes. Far less is known about the counterregulatory mechanisms that repress transcriptional activity in these pathways during resolution. Here, we investigated the transient nature of hypoxia-induced tumor necrosis factor (TNF)alpha in T84 cells, a process we have previously shown to involve phosphorylation-dependent degradation of the cAMP-response element-binding protein (CREB). Initial studies indicate hypoxia-induced TNFalpha to be a transient event, the resolution of which is associated with the appearance of a higher molecular weight modified form of CREB. Gene array analysis of mRNA derived from hypoxic cells identified a time-dependent induction of small ubiquitin-related modifier (SUMO)-1 mRNA. In prolonged hypoxia, CREB is posttranslationally modified by SUMO-1. Furthermore, SUMO-1 overexpression stabilizes CREB in hypoxia and enhances CREB-dependent reporter gene activity. Site-directed mutagenesis of lysine residues K285 and K304 identifies them as SUMO acceptors in vivo and in vitro. Mutation of K304 also results in loss of CREB nuclear localization, implying a role for SUMO-1 modification at this site in the subcellular localization of CREB. Thus, in prolonged hypoxia, CREB is modified by association with SUMO-1. Furthermore, we hypothesize that such an event stabilizes and promotes nuclear localization of CREB and thus complements an endogenous resolution phase for hypoxia-induced inflammatory processes.

Indexed as

HypoxiaAmino Acid MotifsAnimalsBiotinylationBlotting, NorthernBlotting, WesternCattleCell LineCyclic AMP Response Element-Binding ProteinEnzyme-Linked Immunosorbent AssayGene Products, tatHeLa CellsHumansMicroscopy, FluorescenceModels, BiologicalMutagenesis, Site-DirectedCyclic AMP Response Element-Binding ProteinGene Products, tatPeptidesRNA, MessengerSUMO-1 ProteinTumor Necrosis Factor-alpha

Identifiers

PMID12552083
PMCPMC298713
OpenAlexW2119653500

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.