Evidence map›Paper›PMID 12545169›Full record

ArticleOncogene2003

An LOH and mutational investigation of the ST7 gene locus in human esophageal carcinoma.

Suna Wang, Yuriko Mori, Fumiaki Sato, Jing Yin, Yan Xu, Tong-Tong Zou, Andreea Olaru, Martha C Kimos, Kellie Perry, Florin M Selaru and 7 more

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 2 countries.

Suna WangDepartment of Medicine, Division of Gastroenterology and Greenebaum Cancer Center, University of Maryland School of Medicine, Baltimore 21201, USA.
Yuriko Mori
Fumiaki Sato
Jing Yin
Yan Xu
Tong-Tong Zou
Andreea Olaru
Martha C Kimos
Kellie Perry
Florin M Selaru
Elena Deacu
Menghong Sun
Ying-Chang Shi
David Shibata
John M Abraham
Bruce D Greenwald
Stephen J Meltzer
University of Maryland, Baltimore · USBaltimore VA Medical Center · USShanghai Medical College of Fudan University · CN

Funding

Comprehensive Biomarker Development in early EsophagogasU01CA085069 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI MELTZER, STEPHEN J · 1999 to 2009
$4.8M
The Human Colorectal InstabilitomeR01CA077057 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI MELTZER, STEPHEN J · 1998 to 2007
$2.6M
Neoplastic Complications in Inflammatory Bowel DiseaseR01CA095323 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI MELTZER, STEPHEN J · 2003 to 2007
$1.4M
NCI NIH HHS CA77057NCI NIH HHS CA85069NCI NIH HHS CA95323
6 · The paper itself

Abstract

Frequent loss of heterozygosity (LOH) on human chromosome 7q31 has been reported in numerous malignancies. Suppressor of tumorigenicity 7 (ST7) has been identified as a candidate tumor suppressor gene in this region. To identify whether 7q31 and genetic alterations of ST7 were involved in human esophageal carcinogenesis, we performed LOH mapping of a 5.4 cM region at 7q31-q35 in 43 primary esophageal carcinomas, as well as mutational analyses of the ST7 gene in tumors with LOH in this region. Of 43 tumors, 12 (28%) showed LOH at 7q31-q35. These included four (22%) of 18 squamous cell carcinomas and eight (32%) of 25 adenocarcinomas. The peak LOH locus was D7S480, lying 4.2 Mb telomeric to ST7 and showing LOH in eight of 37 informative tumors, or 22%. No mutations were found in the entire coding or flanking intronic regions of the ST7 gene among 12 tumors with 7q-LOH. In addition, quantitative RT-PCR analyses of ST7 mRNA expression levels in 11/13 normal-tumor pairs failed to show more than a 50% decrease in tumor ST7 mRNA relative to matched normal tissues. These data suggest that LOH at 7q31-q35 is involved in the origin or progression of at least a subset of esophageal carcinomas, but that ST7 is not the target gene of this somatic event.

Indexed as

Loss of HeterozygosityMutationTumor Suppressor ProteinsAdenocarcinomaCarcinomaChromosomes, Human, Pair 7DNA, IntergenicEsophageal NeoplasmsGene Expression Regulation, NeoplasticHumansIntronsNeoplasms, Squamous CellProteinsQuantitative Trait LociReference ValuesSequence Analysis, DNADNA, IntergenicProteinsST7 protein, humanTumor Suppressor Proteins

Identifiers

PMID12545169
OpenAlexW1970685342

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.