Evidence map›Paper›PMID 12538872›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

The mouse organellar biogenesis mutant buff results from a mutation in Vps33a, a homologue of yeast vps33 and Drosophila carnation.

Tamio Suzuki, Naoki Oiso, Rashi Gautam, Edward K Novak, Jean-Jacques Panthier, P G Suprabha, Thomas Vida, Richard T Swank, Richard A Spritz

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 122 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Melanosome Biogenesis in the Pigmentation of Mammalian Skin.Integrative and comparative biology · 2021
    Review
  6. Article
  7. Review
  8. Mucopolysaccharidosis-Plus Syndrome.International journal of molecular sciences · 2020
    Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Tamio SuzukiHuman Medical Genetics Program, University of Colorado Health Sciences Center, Denver, CO 80262, USA.
Naoki Oiso
Rashi Gautam
Edward K Novak
Jean-Jacques Panthier
P G Suprabha
Thomas Vida
Richard T Swank
Richard A Spritz
École Nationale Vétérinaire d'Alfort · FRRoswell Park Comprehensive Cancer Center · US

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
MOLECULAR ANALYSIS OF THE BOSS TRANSMEMBRANE LIGANDR01EY010199 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI Helmut J Kramer · 1994 to 2026
$9.7M
STUDIES OF HUMAN PIGMENTATION DISORDERSR01AR039892 · NIAMS · UNIVERSITY OF WISCONSIN MADISON · PI SPRITZ, RICHARD A · 1989 to 2005
$2.5M
MOLECULAR ANALYSIS OF A HERMANSKY-PUDLAK SYNDROME GENER01EY012104 · NEI · ROSWELL PARK CANCER INSTITUTE CORP · PI SWANK, RICHARD T · 1998 to 2005
$1.8M
INHERITED DISEASES AFFECTING PLATELET FUNCTIONR01HL051480 · NHLBI · ROSWELL PARK CANCER INSTITUTE CORP · PI SWANK, RICHARD T · 1995 to 2004
$1.8M
MEGAKARYOCYTE-PLATELET GRANULES IN STORAGE POOL DISEASER01HL031698 · NHLBI · ROSWELL PARK CANCER INSTITUTE CORP · PI SWANK, RICHARD T · 1985 to 2004
$1.5M
NCI NIH HHS CA16056NCI NIH HHS P30 CA016056NEI NIH HHS EY10199NEI NIH HHS EY12104NEI NIH HHS R01 EY010199NEI NIH HHS R01 EY012104NHLBI NIH HHS HL31698NHLBI NIH HHS HL51480NHLBI NIH HHS R01 HL031698NHLBI NIH HHS R01 HL051480NIAMS NIH HHS AR39892NIAMS NIH HHS R01 AR039892
6 · The paper itself

Abstract

In the mouse, more than 16 loci are associated with mutant phenotypes that include defective pigmentation, aberrant targeting of lysosomal enzymes, prolonged bleeding, and immunodeficiency, the result of defective biogenesis of cytoplasmic organelles: melanosomes, lysosomes, and various storage granules. Many of these mouse mutants are homologous to the human Hermansky-Pudlak syndrome (HPS), Chediak-Higashi syndrome, and Griscelli syndrome. We have mapped and positionally cloned one of these mouse loci, buff (bf), which has a mutant phenotype similar to that of human HPS. Mouse bf results from a mutation in Vps33a and thus is homologous to the yeast vacuolar protein-sorting mutant vps33 and Drosophila carnation (car). This is the first found defect of the class C vacuole/prevacuole-associated target soluble N-ethylmaleimide-sensitive factor attachment protein receptor (t-SNARE) complex in mammals and the first mammalian mutant found that is directly homologous to a vps mutation of yeast. VPS33A thus is a good candidate gene for a previously uncharacterized form of human HPS.

Indexed as

MutationAllelesAmino Acid SequenceAnimalsChromosome MappingDNA-Binding ProteinsDNA Mutational AnalysisDrosophilaDrosophila ProteinsEye ProteinsGenetic Complementation TestHermanski-Pudlak SyndromeHumansMelanosomesMiceMice, Inbred C57BLcar protein, DrosophilaDNA-Binding ProteinsDrosophila ProteinsEye ProteinsProteinsVesicular Transport ProteinsVPS33A protein, humanVps33a protein, mouse

Identifiers

PMID12538872
PMCPMC298741
OpenAlexW2113458043

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.