Evidence map›Paper›PMID 12529514›Full record

ArticlePlant physiology2003

The effects of polyethylene glycol on gene expression of developing white spruce somatic embryos.

Claudio Stasolla, Leonel van Zyl, Ulrika Egertsdotter, Deborah Craig, Wenbin Liu, Ron R Sederoff

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 143 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. In Vitro Stress-Mediated Somatic Embryogenesis in Plants.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  7. Article
  8. Article
  9. Morphological analyses and variation in carbohydrate content during the maturation of somatic embryos ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2018
    Article
  10. Review
  11. Journal, genetic engineering & biotechnology · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Claudio StasollaForest Biotechnology Group, Department of Forestry, North Carolina State University, Raleigh, North Carolina 27695-7247, USA. c.stasolla@uwinnipeg.ca
Leonel van Zyl
Ulrika Egertsdotter
Deborah Craig
Wenbin Liu
Ron R Sederoff
North Carolina State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Somatic embryogenic cultures of white spruce (Picea glauca) represent a valuable system to study molecular mechanisms regulating embryo development because many embryos of defined developmental stages can be generated. The inclusion of polyethylene glycol (PEG) in the maturation medium can improve the number and quality of embryos produced. To learn more about the mechanism of action of PEG, we analyzed transcript profiles of stage-specific embryos matured without (control) or with (PEG treated) PEG. RNA extracted from maturing spruce embryos was analyzed on DNA microarrays containing 2,178 cDNAs from loblolly pine (Pinus taeda). The efficiency of heterologous hybridization between spruce and pine species on microarrays has been documented previously (L. van Zyl, S. von Arnold, P. Bozhkov, Y. Chen, U. Egertsdotter, J. MacKay, R. Sederoff, J. Shen, L. Zelena, D. Clapham [2002] Comp Funct Genomics 3: 306-318). Several pine genes, including the apparent homologs to the Arabidopsis genes ZWILLE, FIDDLEHEAD, FUSCA, and SCARECROW, increased in expression after PEG treatments. These genes are known to be involved in the formation of the embryo body plan and in the control of the shoot and root apical meristems. The increased transcript levels of these genes in immature PEG-treated embryos suggest that PEG may improve the quality of spruce somatic embryos by promoting normal differentiation of the embryonic shoot and root. Changes in the transcript levels of many genes involved in sucrose catabolism and nitrogen assimilation and utilization were also observed between control and PEG-treated embryos.

Indexed as

GTP-Binding ProteinsRepressor ProteinsArabidopsis ProteinsArgonaute ProteinsCarbohydrate MetabolismCell DifferentiationCOP9 Signalosome ComplexCulture TechniquesDisastersDNA, ComplementaryGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantIntracellular Signaling Peptides and ProteinsMeristemNitrogenOligonucleotide Array Sequence AnalysisArabidopsis ProteinsArgonaute ProteinsAt2g26250 protein, ArabidopsisAT5G43810 protein, ArabidopsisCOP9 Signalosome ComplexDNA, ComplementaryGPS1 protein, humanGTP-Binding ProteinsIntracellular Signaling Peptides and ProteinsNitrogenPolyethylene GlycolsProteinsRepressor ProteinsRNA, PlantSCR protein, Arabidopsis

Identifiers

PMID12529514
PMCPMC166786
OpenAlexW2137042863

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.