Evidence map›Paper›PMID 12529389›Full record

ArticleMolecular and cellular biology2003

Identification of homeodomain proteins, PBX1 and PREP1, involved in the transcription of murine leukemia virus.

Sheng-Hao Chao, John R Walker, Sumit K Chanda, Nathanael S Gray, Jeremy S Caldwell

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

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  7. microRNA machinery is an integral component of drug-induced transcription inhibition in HIV-1 infection.Journal of RNAi and gene silencing : an international journal of RNA and gene targeting research · 2010
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  13. Genome-scale functional profiling of the mammalian AP-1 signaling pathway.Proceedings of the National Academy of Sciences of the United States of America · 2003
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sheng-Hao ChaoGenomics Institute of the Novartis Research Foundation, San Diego, California 92121, USA.
John R Walker
Sumit K Chanda
Nathanael S Gray
Jeremy S Caldwell
Genomics Institute of the Novartis Research Foundation · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyclin-dependent kinase inhibitors (CDKIs) have been shown to block human immunodeficiency virus and herpes simplex virus. It is hypothesized that CDKIs block viral replication by inhibiting transcription of specific cellular genes. Here we find that three CDKIs, flavopiridol, purvalanol A, and methoxy-roscovitine, block Moloney murine leukemia virus (MLV) transcription events. Using gene expression microarray technology to examine the inhibitory effects of CDKIs, we observed a cellular gene, the pre-B-cell leukemia transcription factor 1 (Pbx1) gene, down-regulated by CDKI treatment. The PBX consensus element (PCE), TGATTGAC, is conserved in the long terminal repeats of several murine retroviruses, including Moloney MLV. Mutations in the PCE completely inhibited viral transcription whereas overexpression of PBX1 and a PBX1-associated protein, PREP1, enhanced viral transcription. The interaction between the PCE and PBX1-PREP1 proteins was confirmed by gel shift experiments. Blocking PBX1 protein synthesis resulted in a significant decrease in viral transcription. Collectively, our results represent the first work demonstrating that the homeodomain proteins PBX1 and PREP1 are cellular factors involved in Moloney MLV transcription regulation.

Indexed as

3T3 CellsAnimalsBase SequenceCell LineConsensus SequenceCyclin-Dependent KinasesDNA-Binding ProteinsDNA, ViralEnzyme InhibitorsFlavonoidsHomeodomain ProteinsHumansMiceMoloney murine leukemia virusPiperidinesPre-B-Cell Leukemia Transcription Factor 1alvocidibCyclin-Dependent KinasesDNA-Binding ProteinsDNA, ViralEnzyme InhibitorsFlavonoidsHomeodomain ProteinsPBX1 protein, humanPiperidinesPKNOX1 protein, humanPknox1 protein, mousePre-B-Cell Leukemia Transcription Factor 1Proto-Oncogene Proteins

Identifiers

PMID12529389
PMCPMC140703
OpenAlexW2107980342

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.