Evidence map›Paper›PMID 12527723›Full record

ArticleThe Journal of physiology2003

Structure, function and immunolocalization of a proton-coupled amino acid transporter (hPAT1) in the human intestinal cell line Caco-2.

Zhong Chen, You-Jun Fei, Catriona M H Anderson, Katherine A Wake, Seiji Miyauchi, Wei Huang, David T Thwaites, Vadivel Ganapathy

Open access · greenAbstract read
In one paragraph

Article in The Journal of physiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 160 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Development of a Chemogenetic Approach to Manipulate Intracellular pH.Journal of the American Chemical Society · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. D-Serine Signaling and NMDAR-Mediated Synaptic Plasticity Are Regulated by System A-Type of Glutamine/D-Serine Dual Transporters.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  17. Review
  18. New aspects of amino acid metabolism in cancer.British journal of cancer · 2020
    Review
  19. Trading amino acids at the aphid-Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Zhong ChenDepartment of Biochemistry and Molecular Biology, Medical College of Georgia, Augusta, GA 30912, USA.
You-Jun Fei
Catriona M H Anderson
Katherine A Wake
Seiji Miyauchi
Wei Huang
David T Thwaites
Vadivel Ganapathy
Newcastle University · GBAugusta University · US

Funding

CARNITINE TRANSPORTERS: STRUCTURE, FUNCTION &REGULATIONR01HL064196 · NHLBI · MEDICAL COLLEGE OF GEORGIA (MCG) · PI GANAPATHY, VADIVEL · 2000 to 2003
$1.0M
Immune Tolerance;Sigma Receptor as a Therapeutic TargetR21AI049849 · NIAID · MEDICAL COLLEGE OF GEORGIA (MCG) · PI GANAPATHY, VADIVEL · 2001 to 2003
$646k
NHLBI NIH HHS HL 64196NHLBI NIH HHS R01 HL064196NIAID NIH HHS AI 49849NIAID NIH HHS R21 AI049849
6 · The paper itself

Abstract

The human orthologue of the H(+)-coupled amino acid transporter (hPAT1) was cloned from the human intestinal cell line Caco-2 and its functional characteristics evaluated in a mammalian cell heterologous expression system. The cloned hPAT1 consists of 476 amino acids and exhibits 85 % identity with rat PAT1. Among the various human tissues examined by Northern blot, PAT1 mRNA was expressed most predominantly in the intestinal tract. When expressed heterologously in mammalian cells, hPAT1 mediated the transport of alpha-(methylamino)isobutyric acid (MeAIB). The cDNA-induced transport was Na(+)-independent, but was energized by an inwardly directed H(+) gradient. hPAT1 interacted with glycine, L-alanine, L-proline, alpha-aminoisobutyrate (AIB) and gamma-aminobutyrate (GABA), as evidenced from direct transport measurements and from competition experiments with MeAIB as a transport substrate. hPAT1 also recognized the D-isomers of alanine and proline. With serine and cysteine, though the L-isomers did not interact with hPAT1 to any significant extent, the corresponding D-isomers were recognized as substrates. With proline and alanine, the affinity was similar for L- and D-isomers. However, with cysteine and serine, the D-isomers showed 6- to 8-fold higher affinity for hPAT1 than the corresponding L-isomers. These functional characteristics of hPAT1 closely resemble those that have been described previously for the H(+)-coupled amino acid transport system in Caco-2 cells. Furthermore, there was a high degree of correlation (r(2) = 0.93) between the relative potencies of various amino acids to inhibit the H(+)-coupled MeAIB transport measured with native Caco-2 cells and with hPAT1 in the heterologous expression system. Immunolocalization studies showed that PAT1 was expressed exclusively in the apical membrane of Caco-2 cells. These data suggest that hPAT1 is responsible for the H(+)-coupled amino acid transport expressed in the apical membrane of Caco-2 cells.

Indexed as

Amino Acid SequenceAmino Acid Transport SystemsCaco-2 CellsDigestive SystemDNA, ComplementaryExonsHumansImmunologic TechniquesIntestinal MucosaIntestinesIntronsMolecular Sequence DataRNA, MessengerStructure-Activity RelationshipSymportersTissue DistributionAmino Acid Transport SystemsDNA, ComplementaryRNA, MessengerSLC36A1 protein, humanSymporters

Identifiers

PMID12527723
PMCPMC2342508
OpenAlexW2128335242

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.