Evidence map›Paper›PMID 12524278›Full record

ArticleBiophysical journal2003

Proton transfer in gramicidin channels is modulated by the thickness of monoglyceride bilayers.

Anatoly Chernyshev, Kathryn M Armstrong, Samuel Cukierman

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Anatoly ChernyshevDept. of Physiology, Loyola University Medical Center, Maywood, Illinois 60153, USA.
Kathryn M Armstrong
Samuel Cukierman
Loyola University Medical Center · US

Funding

NOVEL GRAMICIDIN DIMER CHANNELS: STRUCTURE AND FUNCTIONR01GM059674 · NIGMS · LOYOLA UNIVERSITY CHICAGO · PI CUKIERMAN, SAMUEL · 2000 to 2003
$1.1M
NIGMS NIH HHS GM-59674NIGMS NIH HHS R01 GM059674
6 · The paper itself

Abstract

The thickness of monoglyceride planar bilayers has significant effects on the transfer of protons in both native gramicidin A (gA) and in covalently linked SS- and RR-dioxolane-linked gA proteins. Planar bilayers with various thicknesses were formed from an appropriate combination of monoglyceride with various fatty acid lengths and solvent. Bilayer thicknesses ranged from 25 A (monoolein in squalene) to 54 A (monoeicosenoin in decane). Single-channel conductances to protons (g(H)) were measured in the concentration range of 10-5000 mM HCl. In native gA as well as in RR channels, the shape of the log(g(H))-log([H(+)]) relationships was nonlinear and remained basically unaltered in monoglyceride bilayers with various thicknesses. For both native gA and RR channels, g(H) values were systematically and significantly larger in thin than in thick bilayers. By contrast, the shape of the log(g(H))-log([H(+)]) relationships in the SS channel was linear (with a slope considerably smaller than 1) in thick (>37 A) bilayers. However, in thin (<37 A) bilayers these plots became nonlinear and g(H) values approached those obtained in native gA channels. The linearization of the log-log plots in the SS channel in thick bilayers is a consequence of a dramatic increase (instead of a decrease as in native gA and RR channels) of g(H) in these bilayers in [H(+)] <1 M. The gating characteristics of the various gA channels as a function of bilayer thickness followed the same pattern as described previously. It was noticed, however, that in the thickest monoglyceride bilayer used in this study, both the SS- and RR-dioxolane-linked channels opened in a mode of bursting activity instead of remaining in the open state as in thin bilayers. It is proposed that the thickness of monoglyceride bilayers modulates proton transfer in native gA channels by a combination of factors including the access resistances of channels to H(+), and fluctuations in both the structure of the lipid bilayer and in the distance between gA monomers. The differential effects of relatively thick monoglyceride bilayers on proton transfer in both dioxolane-linked gA channels must relate to distinct interactions between the bilayers and the SS and RR dioxolanes.

Indexed as

ProtonsElectric CapacitanceElectric ConductivityEnergy TransferGlyceridesGramicidinHydrogen-Ion ConcentrationIon Channel GatingIon ChannelsLipid BilayersMembrane FluidityMembrane PotentialsMembranes, ArtificialMolecular ConformationProtein ConformationSolventsGlyceridesGramicidinIon ChannelsLipid BilayersMembranes, ArtificialProtonsSolventsWater

Identifiers

PMID12524278
PMCPMC1302606
OpenAlexW1991993300

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.