Evidence map›Paper›PMID 12524263›Full record

ArticleBiophysical journal2003

Buffers and oscillations in intracellular Ca2+ dynamics.

Martin Falcke

Open access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Biophysical journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 99 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Modelling spatio-temporal interactions between second messengers CaJournal of bioenergetics and biomembranes · 2024
    Article
  5. Cross Talking Calcium, IPCell biochemistry and biophysics · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Mechanistic insights of neuronal calcium and IPEuropean biophysics journal : EBJ · 2023
    Article
  10. Article
  11. Stationary CaBiophysical journal · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Martin FalckeHahn Meitner Institute, Glienicker Str. 100, 14109 Berlin, Germany. falcke@hmi.de
Fraunhofer Institute for Telecommunications, Heinrich Hertz Institute · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

I model the behavior of intracellular Ca(2+) release with high buffer concentrations. The model uses a spatially discrete array of channel clusters. The channel subunit dynamics is a stochastic representation of the DeYoung-Keizer model. The calculations show that the concentration profile of fast buffer around an open channel is more localized than that of slow buffers. Slow buffers allow for release of larger amounts of Ca(2+) from the endoplasmic reticulum and hence bind more Ca(2+) than fast buffers with the same dissociation constant and concentration. I find oscillation-like behavior for high slow buffer concentration and low Ca(2+) content of the endoplasmic reticulum. High concentration of slow buffer leads to oscillation-like behavior by repetitive wave nucleation for high Ca(2+) content of the endoplasmic reticulum. Localization of Ca(2+) release by slow buffer, as used in experiments, can be reproduced by the modeling approach.

Indexed as

Models, BiologicalBuffersCalciumCalcium SignalingCell MembraneComputer SimulationEndoplasmic ReticulumIon Channel GatingIon TransportModels, ChemicalSensitivity and SpecificityStochastic ProcessesBuffersCalcium

Identifiers

PMID12524263
PMCPMC1302591
OpenAlexW2093351969

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.