Evidence map›Paper›PMID 12523656›Full record

ReviewPharmaceutical research2002

A ligand-based approach to understanding selectivity of nuclear hormone receptors PXR, CAR, FXR, LXRalpha, and LXRbeta.

Sean Ekins, Leonid Mirny, Erin G Schuetz

Abstract readReview
PubMed Publisher
In one paragraph

Review in Pharmaceutical research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Review
  2. Structure-based molecular modeling in SAR analysis and lead optimization.Computational and structural biotechnology journal · 2021
    Review
  3. Review
  4. Review
  5. Article
  6. Small-molecule modulators of PXR and CAR.Biochimica et biophysica acta · 2016
    Review
  7. Article
  8. Review
  9. Pregnane X receptor and drug-induced liver injury.Expert opinion on drug metabolism & toxicology · 2014
    Review
  10. Article
  11. Article
  12. Review
  13. Role of CAR and PXR in xenobiotic sensing and metabolism.Expert opinion on drug metabolism & toxicology · 2012
    Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sean EkinsConcurrent Pharmaceuticals Inc., Fort Washington, Pennsylvania 19034, USA. sekins@concurrentpharma.com
Leonid Mirny
Erin G Schuetz

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years discussion of nuclear hormone receptors, transporters, and drug-metabolizing enzymes has begun to take place as our knowledge of the overlapping ligand specificity of each of these proteins has deepened. This ligand specificity is potentially valuable information for influencing future drug design, as it is important to avoid certain enzymes or transporters in order to circumvent potential drug-drug interactions. Similarly, it is critical that the induction of these same proteins via nuclear hormone receptors is avoided, as this can result in further toxicities. Using a ligand-based approach in this review we describe new and previously published computational models for PXR, CAR, FXR, LXRalpha, and LXRbeta that may help in understanding the complexity of interactions between transporters and enzymes. The value of these types of models is that they may enable us to design molecules to selectively modulate pathways for therapeutic effect and in addition predict the potential for drug interactions more reliably. Simultaneously, we might learn which came first: the transporter, the enzyme, or the nuclear hormone receptor?

Indexed as

Amino Acid SequenceAnimalsConstitutive Androstane ReceptorDNA-Binding ProteinsHumansLigandsLiver X ReceptorsMolecular Sequence DataOrphan Nuclear ReceptorsPregnane X ReceptorReceptor, Farnesoid X-ActivatedReceptors, Cytoplasmic and NuclearReceptors, SteroidSequence Homology, Amino AcidTranscription FactorsConstitutive Androstane ReceptorDNA-Binding ProteinsLigandsLiver X ReceptorsNR1H3 protein, humanOrphan Nuclear ReceptorsPregnane X ReceptorReceptor, Farnesoid X-ActivatedReceptors, Cytoplasmic and NuclearReceptors, SteroidTranscription Factors

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.