Evidence map›Paper›PMID 12522039›Full record

ArticleClinical and diagnostic laboratory immunology2003

Alterations in T-cell receptor Vbeta repertoire of CD4 and CD8 T lymphocytes in human immunodeficiency virus-infected children.

Monica Kharbanda, Thomas W McCloskey, Rajendra Pahwa, Mei Sun, Savita Pahwa

Open access · diamondAbstract read
In one paragraph

Article in Clinical and diagnostic laboratory immunology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.2field-weighted citation impact, top 56% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Diabetic Wound-Healing Science.Medicina (Kaunas, Lithuania) · 2021
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Monica KharbandaImmunology and Inflammation Center, North Shore LIJ Research Institute, North Shore LIJ Health System, New York University School of Medicine, Manhasset, New York 11030, USA.
Thomas W McCloskey
Rajendra Pahwa
Mei Sun
Savita Pahwa
Northwell Health · US

Funding

IMMUNE RESPONSE IN HIV-INFECTED CHILDRENR01AI048857 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI PAHWA, SAVITA · 2000 to 2003
$1.3M
CD8 T CELLS IN HIV DISEASE IN CHILDRENR01HD037345 · NICHD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI PAHWA, SAVITA · 1999 to 2001
$610k
HIV ENVELOPE GLYCOPROTEINS AND IMMUNITYR01AI028281 · NIAID · NORTH SHORE UNIVERSITY HOSPITAL · PI PAHWA, SAVITA · 1989 to 2000
$421k
NIAID NIH HHS AI28281NIAID NIH HHS AI48857NIAID NIH HHS R01 AI048857NICHD NIH HHS HD37345NICHD NIH HHS R01 HD037345
6 · The paper itself

Abstract

Perturbations in the T-cell receptor (TCR) Vbeta repertoire were assessed in the CD4 and CD8 T lymphocytes of human immunodeficiency virus (HIV)-infected children who were receiving therapy during the chronic phase of infection by flow cytometry (FC) and PCR analysis. By FC, representation of 21 TCR Vbeta subfamilies was assessed for an increased or decreased percentage in CD4 and CD8 T cells, and by PCR, 22 TCR Vbeta subfamilies of CD4 and CD8 T cells were analyzed by CDR3 spectratyping for perturbations and reduction in the number of peaks, loss of Gaussian distribution, or clonal dominance. The majority of the TCR Vbeta subfamilies were examined by both methods and assessed for deviation from the norm by comparison with cord blood samples. The CD8-T-lymphocyte population exhibited more perturbations than the CD4 subset, and clonal dominance was present exclusively in CD8 T cells. Of the 55 total CD8-TCR Vbeta families classified with clonal dominance by CDR3 spectratyping, only 18 of these exhibited increased expression by FC. Patients with high numbers of CD8-TCR Vbeta families with decreased percentages had reduced percentages of total CD4 T cells. Increases in the number of CD4-TCR Vbeta families with increased percentages showed a positive correlation with skewing. Overall, changes from normal were often discordant between the two methods. This study suggests that the assessment of HIV-induced alterations in TCR Vbeta families at cellular and molecular levels yields different information and that our understanding of the immune response to HIV is still evolving.

Indexed as

AdolescentCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesChildChild, PreschoolComplementarity Determining RegionsFlow CytometryHIV InfectionsHumansInfantLymphocyte CountPolymerase Chain ReactionReceptors, Antigen, T-Cell, alpha-betaT-Lymphocyte SubsetsComplementarity Determining RegionsReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID12522039
PMCPMC145262
OpenAlexW2129196766

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.