Evidence map›Paper›PMID 12519975›Full record

ArticleNucleic acids research2003

GOBASE--a database of mitochondrial and chloroplast information.

Emmet A O'Brien, Elarbi Badidi, Ania Barbasiewicz, Cristina deSousa, B Franz Lang, Gertraud Burger

Abstract read
In one paragraph

Article in Nucleic acids research, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. GOBASE: an organelle genome database.Nucleic acids research · 2009
    Article
  3. Article
  4. Article
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Emmet A O'BrienProgram in Evolutionary Biology, Canadian Institute for Advanced Research, Departement de Biochimie, Universite de Montreal, 2900 Boulevard Edouard-Montpetit, Montreal, Quebec H3T 1J4, Canada. eobrien@bch.umontreal.ca
Elarbi Badidi
Ania Barbasiewicz
Cristina deSousa
B Franz Lang
Gertraud Burger

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

GOBASE is a relational database containing integrated sequence, RNA secondary structure and biochemical and taxonomic information about organelles. GOBASE release 6 (summer 2002) contains over 130 000 mitochondrial sequences, an increase of 37% over the previous release, and more than 30 000 chloroplast sequences in a new auxiliary database. To handle this flood of new data, we have designed and implemented GOpop, a Java system for population and verification of the database. We have also implemented a more powerful and flexible user interface using the PHP programming language. http://megasun.bch.umontreal.ca/gobase/gobase.html.

Indexed as

Databases, GeneticAnimalsChloroplastsEvolution, MolecularGenomeMitochondriaMitochondrial ProteinsNucleic Acid ConformationPlant ProteinsRNARNA, ChloroplastRNA, MitochondrialUser-Computer InterfaceMitochondrial ProteinsPlant ProteinsRNARNA, ChloroplastRNA, Mitochondrial

Identifiers

PMID12519975
PMCPMC165537

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.