ArticleNucleic acids research2003
RECODE 2003.
Article in Nucleic acids research, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
34 citing papers in PubMed.
- High-Throughput Sequencing of Phage Display Libraries Reveals Parasitic Enrichment of Indel Mutants Caused by Amplification Bias.International journal of molecular sciences · 2021Article
- Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.Nucleic acids research · 2016Review
- Structural and Functional Characterization of Programmed Ribosomal Frameshift Signals in West Nile Virus Strains Reveals High Structural Plasticity Among cis-Acting RNA Elements.The Journal of biological chemistry · 2016Article
- Evolutionarily conserved orthologous families in phages are relatively rare in their prokaryotic hosts.Journal of bacteriology · 2011Article
- Mining Functional Elements in Messenger RNAs: Overview, Challenges, and Perspectives.Frontiers in plant science · 2011Article
- Recode-2: new design, new search tools, and many more genes.Nucleic acids research · 2010Article
- RNA modifications: a mechanism that modulates gene expression.Methods in molecular biology (Clifton, N.J.) · 2010Review
- FSscan: a mechanism-based program to identify +1 ribosomal frameshift hotspots.Nucleic acids research · 2009Article
- Selection for minimization of translational frameshifting errors as a factor in the evolution of codon usage.Nucleic acids research · 2009Article
- Transterm: a database to aid the analysis of regulatory sequences in mRNAs.Nucleic acids research · 2009Article
- KnotInFrame: prediction of -1 ribosomal frameshift events.Nucleic acids research · 2008Article
- A self-referential model for the formation of the genetic code.Theory in biosciences = Theorie in den Biowissenschaften · 2008Article
- PRFdb: a database of computationally predicted eukaryotic programmed -1 ribosomal frameshift signals.BMC genomics · 2008Article
- Site-specific release of nascent chains from ribosomes at a sense codon.Molecular and cellular biology · 2008Article
- The major form of hepatitis C virus alternate reading frame protein is suppressed by core protein expression.Nucleic acids research · 2008Article
- Ornithine decarboxylase antizyme finder (OAF): fast and reliable detection of antizymes with frameshifts in mRNAs.BMC bioinformatics · 2008Article
- SelenoDB 1.0 : a database of selenoprotein genes, proteins and SECIS elements.Nucleic acids research · 2008Article
- Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation.Genome research · 2007Article
- Genetic analysis of the E site during RF2 programmed frameshifting.RNA (New York, N.Y.) · 2007Article
- FSDB: a frameshift signal database.Computational biology and chemistry · 2007Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
Abstract
The RECODE database is a compilation of translational recoding events (programmed ribosomal frameshifting, codon redefinition and translational bypass). The database provides information about the genes utilizing these events for their expression, recoding sites, stimulatory sequences and other relevant information. The Database is freely available at http://recode.genetics.utah.edu/.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.