Evidence map›Paper›PMID 12519942›Full record

ArticleNucleic acids research2003

NCBI Reference Sequence project: update and current status.

Kim D Pruitt, Tatiana Tatusova, Donna R Maglott

Abstract read
In one paragraph

Article in Nucleic acids research, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Guideline
  2. Microorganisms · 2026
    Article
  3. Review
  4. Article
  5. A NovelBiology · 2021
    Article
  6. Article
  7. Article
  8. Tools for Sequence-Based miRNA Target Prediction: What to Choose?International journal of molecular sciences · 2016
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. A dynamic view of domain-motif interactions.PLoS computational biology · 2012
    Article
  15. Identification of the translocation breakpoints in the Ts65Dn and Ts1Cje mouse lines: relevance for modeling Down syndrome.Mammalian genome : official journal of the International Mammalian Genome Society · 2011
    Article
  16. An integrative method for identifying the over-annotated protein-coding genes in microbial genomes.DNA research : an international journal for rapid publication of reports on genes and genomes · 2011
    Article
  17. Article
  18. Herpesvirus systematics.Veterinary microbiology · 2010
    Article
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kim D PruittNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A Room 6N605, 8600 Rockville Pike, Bethesda, MD 20894, USA. pruitt@ncbi.nlm.nih.gov
Tatiana Tatusova
Donna R Maglott

Funding

NCBI Production Resource DevelopmentZ01LM000160 · NLM · NATIONAL LIBRARY OF MEDICINE · PI OSTELL, JAMES M · 2002 to 2006
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6 · The paper itself

Abstract

The goal of the NCBI Reference Sequence (RefSeq) project is to provide the single best non-redundant and comprehensive collection of naturally occurring biological molecules, representing the central dogma. Nucleotide and protein sequences are explicitly linked on a residue-by-residue basis in this collection. Ideally all molecule types will be available for each well-studied organism, but the initial database collection pragmatically includes only those molecules and organisms that are most readily identified. Thus different amounts of information are available for different organisms at any given time. Furthermore, for some organisms additional intermediate records are provided when the genome sequence is not yet finished. The collection is supplied by NCBI through three distinct pipelines in addition to collaborations with community groups. The collection is curated on an ongoing basis. Additional information about the NCBI RefSeq project is available at http://www.ncbi.nih.gov/RefSeq/.

Indexed as

BiotechnologyDatabases, GeneticAlternative SplicingAnimalsGenomicsHumansMiceProteinsPseudogenesRatsRNAUnited StatesProteinsRNA

Identifiers

PMID12519942
PMCPMC165558

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.