ArticleApplied and environmental microbiology2003
Phylogenetic diversity of lactic acid bacteria associated with paddy rice silage as determined by 16S ribosomal DNA analysis.
Article in Applied and environmental microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.
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Who cites it
50 citing papers in PubMed.
- The coexistence of Lactiplantibacillus and Wickerhamomyces in sugarcane top silage drives potential pathogen suppression and aerobic stability through enhanced lactic acid and acetic acid production.BMC microbiology · 2026Article
- Dynamic Changes in Microorganisms and Metabolites During Silage Fermentation of Whole Winter Wheat.Veterinary sciences · 2025Article
- Effects of Mixing Ratio and Lactic Acid Bacteria Preparation on the Quality of Whole-Plant Quinoa and Whole-Plant Corn or Stevia Powder Mixed Silage.Microorganisms · 2025Article
- Responses of microbial community composition and CAZymes encoding gene enrichment in ensiledApplied and environmental microbiology · 2024Article
- Genotypic and Phenotypic Characteristics of Lactic Acid Bacteria Associated with Forage Plants in the Native Grassland of Western Inner Mongolia and Their Application for Alfalfa Silage Fermentation.Animals : an open access journal from MDPI · 2024Article
- Improvement of silage characteristics ofFrontiers in microbiology · 2024Article
- Effects ofMicroorganisms · 2023Article
- Isolation and characterization of bioprotective lactic acid bacteria from Moroccan fish and seafood.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023Article
- Study on the Quality of Mixed Silage of Rapeseed with Alfalfa or Myriophyllum.International journal of environmental research and public health · 2023Article
- Prevalence of macrolide-lincosamide-streptogramin resistant lactic acid bacteria isolated from food samples.Journal of food science and technology · 2023Article
- Effect of isolated lactic acid bacteria on the quality and bacterial diversity of native grass silage.Frontiers in plant science · 2023Article
- Effects of Isolated LAB on Chemical Composition, Fermentation Quality and Bacterial Community ofMicroorganisms · 2022Article
- Nutritional quality andJournal of advanced veterinary and animal research · 2022Article
- Characterization of Lactic Acid Bacteria Isolated from Banana and Its Application in Silage Fermentation of Defective Banana.Microorganisms · 2022Article
- High-throughput qPCR and 16S rRNA gene amplicon sequencing as complementary methods for the investigation of the cheese microbiota.BMC microbiology · 2022Article
- Freeze-thaw condition limits the fermentation process and accelerates the aerobic deterioration of oat (Frontiers in microbiology · 2022Article
- Effects of inoculation ofFrontiers in microbiology · 2022Article
- Article
- Characteristics of lactic acid bacteria, microbial community and fermentation dynamics of native grass silage prepared in Inner Mongolian Plateau.Frontiers in microbiology · 2022Article
- Isolation, identification and utilization of lactic acid bacteria from silage in a warm and humid climate area.Scientific reports · 2021Article
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3 authors.
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No grant is acknowledged in the PubMed record.
Abstract
A total of 161 low-G+C-content gram-positive bacteria isolated from whole-crop paddy rice silage were classified and subjected to phenotypic and genetic analyses. Based on morphological and biochemical characters, these presumptive lactic acid bacterium (LAB) isolates were divided into 10 groups that included members of the genera Enterococcus, Lactobacillus, Lactococcus, Leuconostoc, Pediococcus, and WEISSELLA: Analysis of the 16S ribosomal DNA (rDNA) was used to confirm the presence of the predominant groups indicated by phenotypic analysis and to determine the phylogenetic affiliation of representative strains. The virtually complete 16S rRNA gene was PCR amplified and sequenced. The sequences from the various LAB isolates showed high degrees of similarity to those of the GenBank reference strains (between 98.7 and 99.8%). Phylogenetic trees based on the 16S rDNA sequence displayed high consistency, with nodes supported by high bootstrap values. With the exception of one species, the genetic data was in agreement with the phenotypic identification. The prevalent LAB, predominantly homofermentative (66%), consisted of Lactobacillus plantarum (24%), Lactococcus lactis (22%), Leuconostoc pseudomesenteroides (20%), Pediococcus acidilactici (11%), Lactobacillus brevis (11%), Enterococcus faecalis (7%), Weissella kimchii (3%), and Pediococcus pentosaceus (2%). The present study, the first to fully document rice-associated LAB, showed a very diverse community of LAB with a relatively high number of species involved in the fermentation process of paddy rice silage. The comprehensive 16S rDNA-based approach to describing LAB community structure was valuable in revealing the large diversity of bacteria inhabiting paddy rice silage and enabling the future design of appropriate inoculants aimed at improving its fermentation quality.
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