Evidence map›Paper›PMID 12511512›Full record

ArticleJournal of bacteriology2003

A cka-gfp transcriptional fusion reveals that the colicin K activity gene is induced in only 3 percent of the population.

Janez Mulec, Zdravko Podlesek, Peter Mrak, Andreja Kopitar, Alojz Ihan, Darja Zgur-Bertok

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 53 citations in OpenAlex.

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  20. The role of SOS boxes in enteric bacteriocin regulation.Microbiology (Reading, England) · 2008
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Janez MulecKarst Research Institute, Scientific Centre of the Slovenian Academy of Sciences and Arts, Postojna, Slovenia.
Zdravko Podlesek
Peter Mrak
Andreja Kopitar
Alojz Ihan
Darja Zgur-Bertok
University of Ljubljana · SISlovenian Academy of Sciences and Arts · SI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In prokaryotes, only a few examples of differential gene expression in cell populations have been described. Colicin production in natural populations of Escherichia coli, while providing a competitive advantage in the natural habitat, also leads to lysis of the toxin-producing cell. Colicin K synthesis has been found to be induced due to an increase in ppGpp (I. Kuhar, J. P. van Putten, D. Zgur-Bertok, W. Gaastra, and B. J. Jordi, Mol. Microbiol. 41:207-216). Using two transcriptional fusions, cka-gfp and cki-gfp, we show that at the single-cell level, the colicin K activity gene cka is expressed in only 3% of the bacterial population upon induction by nutrient starvation. In contrast, the immunity gene cki is expressed in the large majority of the cells. Expression of the cka-gfp fusion in a lexA-defective strain and in a relA spoT mutant strain indicates that differential expression of cka is established primarily at the level of transcription.

Indexed as

Gene Expression Regulation, BacterialTranscription, GeneticBacterial ProteinsColicinsEscherichia coliEscherichia coli ProteinsGreen Fluorescent ProteinsLexA Repressor ProteinLuminescent ProteinsRecombinant Fusion ProteinsRepressor ProteinsSerine EndopeptidasesBacterial ProteinsColicinsEscherichia coli ProteinsGreen Fluorescent ProteinsLexA Repressor ProteinLuminescent ProteinsRecombinant Fusion ProteinsRepressor ProteinsSerine Endopeptidases

Identifiers

PMID12511512
PMCPMC145340
OpenAlexW2146587276

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.