Evidence map›Paper›PMID 12509452›Full record

ArticleMolecular and cellular biology2003

Binding dynamics of structural nucleoporins govern nuclear pore complex permeability and may mediate channel gating.

Nataliya Shulga, David S Goldfarb

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 135 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. DNA Sensor ABCF1 Phase Separates With cccDNA to Inhibit Hepatitis B Virus Replication.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  9. Cotranslational molecular condensation of cochaperones and assembly factors facilitates axonemal dynein biogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Review
  11. Article
  12. Oxidative regulation of TDP-43 self-association by a β-to-α conformational switch.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Article
  14. Article
  15. Small molecules in regulating protein phase separation.Acta biochimica et biophysica Sinica · 2023
    Article
  16. Review
  17. Review
  18. Review
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Nataliya ShulgaDepartment of Biology, University of Rochester, Rochester, New York 14627, USA.
David S Goldfarb
University of Rochester · US

Funding

NUCLEOCYTOPLASMIC TRAFFICKINGR01GM040362 · NIGMS · UNIVERSITY OF ROCHESTER · PI GOLDFARB, DAVID S · 1994 to 1999
–
NUCLEOCYTOPLASMIC TRAFFICKINGR21GM040362 · NIGMS · UNIVERSITY OF ROCHESTER · PI GOLDFARB, DAVID S · 1994 to 1995
–
NUCLEOCYTOPLASMIC TRAFFICKINGR29GM040362 · NIGMS · UNIVERSITY OF ROCHESTER · PI GOLDFARB, DAVID S · 1988 to 1992
–
NIGMS NIH HHS GM40362
6 · The paper itself

Abstract

The nuclear pore complex (NPC) is a permeable sieve that can dilate to facilitate the bidirectional translocation of a wide size range of receptor-cargo complexes. The binding of receptors to FG nucleoporin docking sites triggers channel gating by an unknown mechanism. Previously, we used deoxyglucose and chilling treatments to implicate Nup170p and Nup188p in the control of NPC sieving in Saccharomyces cerevisiae. Here, we report that aliphatic alcohols increase the permeability of wild-type and nup170Delta NPCs. In conjunction with increases in permeability, aliphatic alcohols, deoxyglucose, and chilling trigger the reversible dissociation of several nucleoporins from nup170Delta NPCs. These results are consistent with the hypothesis that NPC gating occurs when molecular latches composed of FG repeats and structural nucleoporins dissociate.

Indexed as

AlcoholsCell NucleusDose-Response Relationship, DrugEthanolGlycolsGreen Fluorescent ProteinsKineticsLuminescent ProteinsMicroscopy, ConfocalNuclear PoreNuclear Pore Complex ProteinsProtein BindingRecombinant Fusion ProteinsSaccharomyces cerevisiaeTime FactorsAlcoholsEthanolGlycolsGreen Fluorescent Proteinshexamethylene glycolLuminescent ProteinsNuclear Pore Complex ProteinsRecombinant Fusion Proteins

Identifiers

PMID12509452
PMCPMC151542
OpenAlexW2149427728

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.