Evidence map›Paper›PMID 12508361›Full record

ArticleWorld journal of gastroenterology2003

Design of a ribozyme targeting human telomerase reverse transcriptase and cloning of it's gene.

Zhi-Ming Hao, Jin-Yan Luo, Jin Cheng, Quan-Yin Wang, Guang-Xiao Yang

Abstract read
In one paragraph

Article in World journal of gastroenterology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Zhi-Ming HaoDepartment of Gastroenterology, 1st Hospital, Xi'an Jiaotong University, Xi'an 710061, Shaanxi Province, China. haozhm@public.xa.sn.cn
Jin-Yan Luo
Jin Cheng
Quan-Yin Wang
Guang-Xiao Yang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo design a hammerhead ribozyme targeting human telomerase reverse transcriptase (hTERT) and clone it's gene for future use in the study of tumor gene therapy.

methodsUsing the software RNA structure, the secondary structure of hTERT mRNA was predicted and the cleavage site of ribozyme was selected. A hammerhead ribozyme targeting this site was designed and bimolecular fold between the ribozyme and hTERT was predicted. The DNA encoding the ribozyme was synthesized and cloned into pGEMEX-1 and the sequence of the ribozyme gene was confirmed by DNA sequencing.

resultsTriplet GUC at 1742 of hTERT mRNA was chosen as the cleavage site of the ribozyme. The designed ribozyme was comprised of 22nt catalytic core and 17nt flanking sequence. Computer-aided prediction suggested that the ribozyme and hTERT mRNA could cofold into a proper conformation. Endonuclease restriction and DNA sequencing confirmed the correct insertion of the ribozyme gene into the vector pGEMEX-1.

conclusionThis fundamental work of successful designing and cloning of an anti-hTERT hammerhead ribozyme has paved the way for further study of inhibiting tumor cell growth by cleaving hTERT mRNA with ribozyme.

Indexed as

Nucleic Acid ConformationCloning, MolecularDNA-Binding ProteinsGenetic TherapyHumansRNA, CatalyticSequence Analysis, DNATelomeraseDNA-Binding Proteinshammerhead ribozymeRNA, CatalyticTelomerase

Identifiers

PMID12508361
PMCPMC4728220

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.