Evidence map›Paper›PMID 12505990›Full record

ArticleThe EMBO journal2003

RelB is required for Peyer's patch development: differential regulation of p52-RelB by lymphotoxin and TNF.

Z Buket Yilmaz, Debra S Weih, Vallabhapurapu Sivakumar, Falk Weih

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 211 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. American journal of physiology. Gastrointestinal and liver physiology · 2022
    Article
  6. Article
  7. NF-kB pathway is involved in microscopic colitis pathogenesis.The Journal of international medical research · 2022
    Article
  8. Review
  9. Article
  10. Review
  11. Origin of the Functional Distinctiveness of NF-κB/p52.Frontiers in cell and developmental biology · 2021
    Review
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Substrate complex competition is a regulatory motif that allows NFκB RelA to license but not amplify NFκB RelB.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  19. Article
  20. Review

48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Z Buket YilmazForschungszentrum Karlsruhe, Institute of Toxicology and Genetics, D-76021 Karlsruhe, Germany.
Debra S Weih
Vallabhapurapu Sivakumar
Falk Weih
FZI Research Center for Information Technology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Targeted disruption of the Rel/NF-kappaB family members NF-kappaB2, encoding p100/p52, and RelB in mice results in anatomical defects of secondary lymphoid tissues. Here, we report that development of Peyer's patch (PP)-organizing centers is impaired in both NF-kappaB2- and RelB-deficient animals. IL-7-induced expression of lymphotoxin (LT) in intestinal cells, a crucial step in PP development, is not impaired in RelB-deficient embryos. LTbeta receptor (LTbetaR)-deficient mice also lack PPs, and we demonstrate that LTbetaR signaling induces p52-RelB and classical p50-RelA heterodimers, while tumor necrosis factor (TNF) activates only RelA. LTbetaR-induced binding of p52-RelB requires the degradation of the inhibitory p52 precursor, p100, which is mediated by the NF-kappaB-inducing kinase (NIK) and the IkappaB kinase (IKK) complex subunit IKKalpha, but not IKKbeta or IKKgamma. Activation of RelA requires all three IKK subunits, but is independent of NIK. Finally, we show that TNF increases p100 levels, resulting in the specific inhibition of RelB DNA binding via the C-terminus of p100. Our data indicate an important role of p52-RelB heterodimers in lymphoid organ development downstream of LTbetaR, NIK and IKKalpha.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsCells, CulturedDNA PrimersGene Expression RegulationIntestinal MucosaLymphotoxin-alphaMiceMice, KnockoutNF-kappa BNF-kappa B p52 SubunitPeyer's PatchesProto-Oncogene ProteinsReverse Transcriptase Polymerase Chain ReactionRNA, MessengerTrans-ActivatorsAdaptor Proteins, Signal TransducingDNA PrimersLymphotoxin-alphaNF-kappa BNF-kappa B p52 SubunitProto-Oncogene ProteinsPsip1 protein, mouseRelb protein, mouseRNA, MessengerTrans-ActivatorsTranscription Factor RelBTranscription FactorsTumor Necrosis Factor-alpha

Identifiers

PMID12505990
PMCPMC140043
OpenAlexW2153516407

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.