Evidence map›Paper›PMID 12505980›Full record

ArticleThe EMBO journal2003

Control of protein life-span by N-terminal methionine excision.

Carmela Giglione, Olivier Vallon, Thierry Meinnel

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 154 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Insights into Active Site Cysteine Residues inInternational journal of molecular sciences · 2025
    Review
  7. Review
  8. Review
  9. Article
  10. Discovery of Two Novel Immunoepitopes and Development of a Peptide-based Sarcoidosis Immunoassay.American journal of respiratory and critical care medicine · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Impact of Protein NLife (Basel, Switzerland) · 2023
    Review
  16. The Potential Role of the Methionine Aminopeptidase GeneInternational journal of molecular sciences · 2022
    Article
  17. Article
  18. Article
  19. Genome-Wide Analysis of theInternational journal of molecular sciences · 2022
    Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Carmela GiglioneProtein Maturation, Trafficking and Signaling, UPR2355, Centre National de la Recherche Scientifique, Institut des Sciences du Végétal, Gif-sur-Yvette, France.
Olivier Vallon
Thierry Meinnel
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peptide deformylases (PDFs) have been discovered recently in eukaryotic genomes, and it appears that N-terminal methionine excision (NME) is a conserved pathway in all compartments where protein synthesis occurs. This work aimed at uncovering the function(s) of NME in a whole proteome, using the chloroplast-encoded proteins of both Arabidopsis thaliana and Chlamydomonas reinhardtii as model systems. Disruption of PDF1B in A.thaliana led to an albino phenotype, and an extreme sensitivity to the PDF- specific inhibitor actinonin. In contrast, a knockout line for PDF1A exhibited no apparent phenotype. Photosystem II activity in C.reinhardtii cells was substantially reduced by the presence of actinonin. Pulse-chase experiments revealed that PDF inhibition leads to destabilization of a crucial subset of chloroplast-encoded photosystem II components in C. reinhardtii. The same proteins were destabilized in pdf1b. Site-directed substitutions altering NME of the most sensitive target, subunit D2, resulted in similar effects. Thus, plastid NME is a critical mechanism specifically influencing the life-span of photosystem II polypeptides. A general role of NME in modulating the half-life of key subsets of proteins is suggested.

Indexed as

AmidohydrolasesMethionineAminopeptidasesAnimalsArabidopsisChlamydomonas reinhardtiiChloroplastsEnzyme StabilityKineticsModels, BiologicalMutagenesis, InsertionalPhotosynthetic Reaction Center Complex ProteinsPhotosystem II Protein ComplexPlastidsRecombinant ProteinsSequence DeletionAmidohydrolasesAminopeptidasesMethioninepeptide deformylasePhotosynthetic Reaction Center Complex ProteinsPhotosystem II Protein ComplexRecombinant Proteins

Identifiers

PMID12505980
PMCPMC140049
OpenAlexW2077817524

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.