Evidence map›Paper›PMID 12503404›Full record

ArticleFolia microbiologica2002

Identification and characterization of Clostridium paraputrificum, a chitinolytic bacterium of human digestive tract.

J Simůnek, J Kopecný, B Hodrová, H Bartonová

Abstract read
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Article in Folia microbiologica, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

J SimůnekInstitute of Animal Physiology and Genetics, Academy of Sciences of the Czech Republic, 104 00 Prague 10, Czechia. simunek@iapg.cas.cz
J Kopecný
B Hodrová
H Bartonová

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A strictly anaerobic, mesophilic and chitinolytic bacterial strain was isolated from human feces. Based on morphological and physiological properties and 16S rRNA sequence analysis the strain was identified as Clostridium paraputrificum. The strain utilized chitin and N-acetyl-D-glucosamine, grew on glucose and hydrolyzed starch. Cultivation of the strain with colloidal chitin as the growth substrate resulted in the production of gas (hydrogen and carbon dioxide) and formation of acetate and lactate (21.6 and 18.9 mmol/L, respectively) and only small quantities of propionate and butyrate (1.7 and 2.6 mmol/L, respectively). In the course of a 10-d cultivation with chitin, the endochitinase activity was detected after 1 d and gradually increased, reaching maximum after 3 d (251 nkat/L N-acetyl-D-glucosamine). The beta-N-acetylglucosaminidase activity appeared just at the beginning of the cultivation, increased to day 2 and then remained nearly constant. More than 90% of chitin added was degraded within 2 d of cultivation. On the zymogram of the extracellular chitinolytic complex were visible at least 6 isoenzymes with molar mass 43.5-65.0 kDa. The temperature optimum of endochitinase and beta-N-acetylglucosaminidase activities was 50 degrees C; the optimum activity of both enzymes was found at pH 4-6.

Indexed as

AnaerobiosisBacterial Typing TechniquesChitinChitinasesClostridiumColonDNA, RibosomalHumansPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNAChitinChitinasesDNA, RibosomalRNA, Ribosomal, 16S

Identifiers

PMID12503404

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.