Evidence map›Paper›PMID 12496083›Full record

ArticleBiophysical journal2002

Toward the physical basis of thermophilic proteins: linking of enriched polar interactions and reduced heat capacity of unfolding.

Huan-Xiang Zhou

Abstract read
In one paragraph

Article in Biophysical journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Engineering enhanced thermostability into theCurrent research in structural biology · 2022
    Article
  5. Article
  6. Review
  7. Role of Proteome Physical Chemistry in Cell Behavior.The journal of physical chemistry. B · 2016
    Review
  8. Electrostatic effects on the folding stability of FKBP12.Protein engineering, design & selection : PEDS · 2016
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Increasing protein stability: importance of DeltaC(p) and the denatured state.Protein science : a publication of the Protein Society · 2010
    Article
  14. Article
  15. Computing protein stabilities from their chain lengths.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Huan-Xiang ZhouInstitute of Molecular Biophysics and Department of Physics, Florida State University, Tallahassee, FL 32306, USA. zhou@sb.fsu.edu

Funding

THEORY OF PROTEIN/PROTEIN ASSOCIATIONR01GM058187 · NIGMS · FLORIDA STATE UNIVERSITY · PI ZHOU, HUAN-XIANG · 1998 to 2016
$3.7M
NIGMS NIH HHS GM 58187
6 · The paper itself

Abstract

The enrichment of salt bridges and hydrogen bonding in thermophilic proteins has long been recognized. Another tendency, featuring lower heat capacity of unfolding (DeltaC(p)) than found in mesophilic proteins, is emerging from the recent literature. Here we present a simple electrostatic model to illustrate that formation of a salt-bridge or hydrogen-bonding network around an ionized group in the folded state leads to increased folding stability and decreased DeltaC(p). We thus suggest that the reduced DeltaC(p) of thermophilic proteins could partly be attributed to enriched polar interactions. A reduced DeltaC(p) might serve as an indicator for the contribution of polar interactions to folding stability.

Indexed as

Hot TemperatureModels, ChemicalModels, MolecularArchaeaArchaeal ProteinsComputer SimulationElectrochemistryEnergy TransferHydrogen BondingMacromolecular SubstancesProtein ConformationProtein DenaturationProtein FoldingProteinsRibonuclease HSaltsArchaeal ProteinsMacromolecular SubstancesProteinsRibonuclease HSaltsSolventsWater

Identifiers

PMID12496083
PMCPMC1302391

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.