Evidence map›Paper›PMID 12482964›Full record

ArticleMolecular and cellular biology2003

Sam68 enhances the cytoplasmic utilization of intron-containing RNA and is functionally regulated by the nuclear kinase Sik/BRK.

John H Coyle, Brian W Guzik, Yeou-Cherng Bor, Li Jin, Lucia Eisner-Smerage, Stephen J Taylor, David Rekosh, Marie-Louise Hammarskjöld

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 106 citations in OpenAlex.

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  4. Targeting protein tyrosine kinase 6 in cancer.Biochimica et biophysica acta. Reviews on cancer · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

John H CoyleMyles H. Thaler Center for AIDS and Human Retrovirus Research and Department of Microbiology, University of Virginia, Charlottesville 22908, USA.
Brian W Guzik
Yeou-Cherng Bor
Li Jin
Lucia Eisner-Smerage
Stephen J Taylor
David Rekosh
Marie-Louise Hammarskjöld
University of Virginia · USUniversity of California, Berkeley · US

Funding

HIV PARTICLE FORMATION AND RNA PACKAGINGR01AI047008 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI REKOSH, DAVID M · 2000 to 2003
$1.0M
REGULATION OF HIV RNA PROCESSING AND TRANSPORTR01AI034721 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HAMMARSKJOLD, MARIE-LOUISE · 1994 to 2002
$734k
Mechanisms Underlying Sam68 Enhancement of CTE FunctionF32AI010630 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI COYLE, JOHN H · 2001 to 2003
$127k
NIAID NIH HHS AI10630NIAID NIH HHS AI34721NIAID NIH HHS AI47008NIAID NIH HHS F32 AI010630NIAID NIH HHS R01 AI047008
6 · The paper itself

Abstract

Cells normally restrict the nuclear export and expression of intron-containing mRNA. In many cell lines, this restriction can be overcome by inclusion of cis-acting elements, such as the Mason-Pfizer monkey virus constitutive transport element (CTE), in the RNA. In contrast, we observed that CTE-mediated expression from human immunodeficiency virus Gag-Pol reporters was very inefficient in 293 and 293T cells. However, addition of Sam68 led to a dramatic increase in the amount of Gag-Pol proteins produced in these cells. Enhancement of CTE function was not seen when a Sam68 point mutant (G178E) that is defective for RNA binding was used. Additionally, the effect of Sam68 was inhibited in a dose-dependent manner by coexpression of an activated form of the nuclear kinase Sik/BRK that hyperphosphorylated Sam68. RNA analysis showed that cytoplasmic Gag-Pol-CTE RNA levels were only slightly enhanced by the addition of Sam68, compared to a 60- to 70-fold increase in the levels of Gag-Pol protein expression. Thus, in this system, Sam68 functioned to enhance the cytoplasmic utilization of RNA containing the CTE. These results suggest that Sam68 may interact with specific RNAs in the nucleus to provide a "mark" that affects their cytoplasmic fate. They also provide further evidence of links between signal transduction and RNA utilization.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsCells, CulturedCytoplasmDNA-Binding ProteinsFusion Proteins, gag-polGenes, envHIVHumansIntronsMason-Pfizer monkey virusNeoplasm ProteinsNuclear ProteinsNucleocytoplasmic Transport ProteinsPhosphorylationPoint MutationAdaptor Proteins, Signal TransducingDNA-Binding ProteinsFusion Proteins, gag-polKHDRBS1 protein, humanKhdrbs1 protein, mouseNeoplasm ProteinsNuclear ProteinsNucleocytoplasmic Transport ProteinsNXF1 protein, humanProtein-Tyrosine KinasesPTK6 protein, humanPtk6 protein, mouseRecombinant ProteinsRegulatory Sequences, Ribonucleic AcidRNA-Binding ProteinsRNA, Messengersrc-Family Kinases

Identifiers

PMID12482964
PMCPMC140664
OpenAlexW2133961272

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.