Evidence map›Paper›PMID 12463881›Full record

ArticleProceedings. AMIA Symposium2002

PQL: a declarative query language over dynamic biological schemata.

P Mork, R Shaker, A Halevy, P Tarczy-Hornoch

Abstract read
PubMed Full text at PMC
In one paragraph

Article in Proceedings. AMIA Symposium, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. BioMediator data integration: beyond genomics to neuroscience data.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2005
    Article
  3. Terminological mapping for high throughput comparative biology of phenotypes.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing · 2004
    Article
  4. Article
  5. QIS: A framework for biomedical database federation.Journal of the American Medical Informatics Association : JAMIA
    Article
  6. Automated database mediation using ontological metadata mappings.Journal of the American Medical Informatics Association : JAMIA
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

P MorkComputer Science and Engineering, University of Washington, Seattle, WA, USA.
R Shaker
A Halevy
P Tarczy-Hornoch

Funding

GENESEEK: DATA INTEGRATION SYSTEM FOR GENETIC DATABASESR01HG002288 · NHGRI · UNIVERSITY OF WASHINGTON · PI TARCZY-HORNOCH, PETER · 2000 to 2005
$2.0M
NHGRI NIH HHS 1R01 HG02288
6 · The paper itself

Abstract

We introduce the PQL query language (PQL) used in the GeneSeek genetic data integration project. PQL incorporates many features of query languages for semi-structured data. To this we add the ability to express metadata constraints like intended semantics and database curation approach. These constraints guide the dynamic generation of potential query plans. This allows a single query to remain relevant even in the presence of source and mediated schemas that are continually evolving, as is often the case in data integration.

Indexed as

Databases, GeneticProgramming LanguagesComputational BiologyInformation Storage and Retrieval

Identifiers

PMID12463881
PMCPMC2244486

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.