Evidence map›Paper›PMID 12457280›Full record

ArticleGene therapy2002

Simultaneous targeted alteration of the tyrosinase and c-kit genes by single-stranded oligonucleotides.

V Alexeev, O Igoucheva, K Yoon

Abstract read
PubMed Publisher
In one paragraph

Article in Gene therapy, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 45 citations in OpenAlex.

  1. Recent advances in Duchenne muscular dystrophy.Degenerative neurological and neuromuscular disease · 2012
    Review
  2. Review
  3. Article
  4. Article
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  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Increased efficiency of oligonucleotide-mediated gene repair through slowing replication fork progression.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Expectations and reality in gene repair.Nature biotechnology · 2002
    Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

V AlexeevDepartment of Dermatology and Cutaneous Biology, Jefferson Institute of Molecular Medicine, Thomas Jefferson University, Jefferson Medical College, Philadelphia, PA, USA.
O Igoucheva
K Yoon
Thomas Jefferson University · USJefferson Institute · US

Funding

TRANSGENIC MICE WITH EPIDERMOLYSIS BULLOSAP01AR038923 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI UITTO, JOUNI · 1987 to 2006
$7.8M
MECHANISMS OF GENE TARGETING BY RNA-DNA OLIGONUCLEOTIDER21GM061942 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI YOON, KYONGGEUN · 2000 to 2001
$237k
NEW GENE THERAPY FOR RHEUMATOID ARTHRITISR01AR044350 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI YOON, KYONGGEUN · 1997 to 1999
–
NIAMS NIH HHS AR38923NIAMS NIH HHS AR44350NIGMS NIH HHS GM61942
6 · The paper itself

Abstract

We have shown that various forms of oligonucleotides, chimeric RNA-DNA oligonucleotide (RDO) and single-stranded oligodeoxynucleotide (ODN), are capable of chromosomal gene alterations in mammalian cells. Using two ODNs we corrected an inactivating mutation in the tyrosinase gene and introduced an activating mutation into the c-kit gene in a single albino mouse melanocyte. Relying on a pigmentation change caused by tyrosinase gene correction, we determined the frequency of gene targeting events ranging from 2 x 10(-4) to 1 x 10(-3), which is comparable to our previously published data using RDO. However, ODN showed more reproducible gene correction than RDO and produced pigmented cells among 60% of experiments, in comparison with 10% by RDO. DNA sequence analysis of the converted cells revealed that two out of eight individual pigmented clones harbored the mutated c-kit gene. Targeted modification of both genes resulted in the ability of the tyrosinase to convert tyrosine to melanin, and in the constitutive activation of the Kit receptor kinase. Thus, for the first time, we demonstrate the feasibility of simultaneous targeting of two genes in a single cell and show that a selection strategy to identify cells that have undergone a gene modification can enrich the targeted cells with the desired gene alteration.

Indexed as

DNA, Single-StrandedMelanocytesAmino Acid SequenceAnimalsBase SequenceBlotting, WesternCells, CulturedGene TargetingMiceMolecular Sequence DataMonophenol MonooxygenaseOligonucleotidesPiebaldismPolymorphism, Restriction Fragment LengthProto-Oncogene Proteins c-kitSequence Analysis, DNADNA, Single-StrandedMonophenol MonooxygenaseOligonucleotidesProto-Oncogene Proteins c-kit

Identifiers

PMID12457280
OpenAlexW2321923847

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.