Evidence map›Paper›PMID 12456883›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Murine apolipoprotein serum amyloid A in solution forms a hexamer containing a central channel.

Limin Wang, Hilal A Lashuel, Thomas Walz, Wilfredo Colon

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Serum amyloid A - a review.Molecular medicine (Cambridge, Mass.) · 2018
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Structural mechanism of serum amyloid A-mediated inflammatory amyloidosis.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Limin WangDepartment of Chemistry, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA.
Hilal A Lashuel
Thomas Walz
Wilfredo Colon
Brigham and Women's Hospital · USHarvard University · US

Funding

Single particle reconstructionP01GM062580 · NIGMS · HARVARD MEDICAL SCHOOL · PI WALZ, THOMAS · 2001 to 2016
$23.7M
NIGMS NIH HHS GM62580NIGMS NIH HHS P01 GM062580
6 · The paper itself

Abstract

Serum amyloid A (SAA) is a small apolipoprotein that binds to high-density lipoproteins in the serum. Although SAA seems to play a role in host defense and lipid transport and metabolism, its specific functions have not been defined. Despite the growing implications that SAA plays a role in the pathology of various diseases, a high-resolution structure of SAA is lacking because of limited solubility in the high-density lipoprotein-free form. In this study, complementary methods including glutaraldehyde cross-linking, size-exclusion chromatography, and sedimentation-velocity analytical ultracentrifugation were used to show that murine SAA2.2 in aqueous solution exists in a monomer-hexamer equilibrium. Electron microscopy of hexameric SAA2.2 revealed that the subunits are arranged in a ring forming a putative central channel. Limited trypsin proteolysis and mass spectrometry analysis identified a significantly protease-resistant SAA2.2 region comprising residues 39-86. The isolated 39-86 SAA2.2 fragment did not hexamerize, suggesting that part of the N terminus is involved in SAA2.2 hexamer formation. Circular-dichroism spectrum deconvolution and secondary-structure prediction suggest that SAA2.2 contains approximately 50% of its residues in alpha-helical conformation and <10% in beta-structure. These findings are consistent with the recent discovery that human SAA1.1 forms a membrane channel and have important implications for understanding the 3D structure, multiple functions, and pathological roles of this highly conserved protein.

Indexed as

AmyloidosisAnimalsBiopolymersChromatography, GelChromatography, High Pressure LiquidCircular DichroismCross-Linking ReagentsGlutaralMass SpectrometryMiceMicroscopy, ElectronProtein Structure, SecondaryRecombinant Fusion ProteinsSerum Amyloid A ProteinStructure-Activity RelationshipTrypsinBiopolymersCross-Linking ReagentsGlutaralRecombinant Fusion ProteinsSaa2 protein, mouseSerum Amyloid A ProteinTrypsin

Identifiers

PMID12456883
PMCPMC138545
OpenAlexW2109567091

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.